RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 COA7Q96BR5 231 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 FEZ1Q99689 392 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 ISY1Q9ULR0 285 aaKnown RBP11.59□□□□□ -0.55
DDX41-203ENST00000504781 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 CSADQ9Y600 493 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 ZHX2Q9Y6X8 837 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 LAD1O00515 517 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 PPP1R11O60927 126 aaPredicted RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 FOSP01100 380 aaPredicted RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 PTPREP23469 700 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 NONOQ15233 471 aaKnown RBP eCLIP11.58□□□□□ -0.56
DDX41-203ENST00000504781 SH3D19Q5HYK7 790 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 TTC38Q5R3I4 469 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 ARL6IP4Q66PJ3 421 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 PIK3AP1Q6ZUJ8 805 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 MOB2Q70IA6 237 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 ANKRD13AQ8IZ07 590 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 KRI1Q8N9T8 703 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 FERMT2Q96AC1 680 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 NAP1L4Q99733 375 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 MAF1Q9H063 256 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 RANBP17Q9H2T7 1088 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 SRPRBQ9Y5M8 271 aaKnown RBP11.58□□□□□ -0.56
DDX41-203ENST00000504781 ATAD5Q96QE3 1844 aa11.58□□□□□ -0.56
DDX41-203ENST00000504781 THSD7BQ9C0I4 1608 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 FAM155AB1AL88 458 aaPredicted RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 TRPA1O75762 1119 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 USP11P51784 963 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 ZNF445P59923 1031 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 PPATQ06203 517 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 PRKG1Q13976 671 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 EARS2Q5JPH6 523 aaKnown RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 AXDND1Q5T1B0 1012 aaPredicted RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 CCDC183Q5T5S1 534 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 REXO1Q8N1G1 1221 aaKnown RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
DDX41-203ENST00000504781 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 HOXC10Q9NYD6 342 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 MAP3K20Q9NYL2 800 aaKnown RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 TMOD4Q9NZQ9 345 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 TMEM63CQ9P1W3 806 aa11.57□□□□□ -0.56
DDX41-203ENST00000504781 MRPL11Q9Y3B7 192 aaKnown RBP11.57□□□□□ -0.56
DDX41-203ENST00000504781 FAM237AA0A1B0GTK4 181 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 PIK3CDO00329 1044 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 CXCL11O14625 94 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 CTAGE5O15320 804 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 SLC10A3P09131 477 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 COG2Q14746 738 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 ZNF174Q15697 407 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
DDX41-203ENST00000504781 CCDC73Q6ZRK6 1079 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 ERO1BQ86YB8 467 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 ELOA2Q8IYF1 753 aaPredicted RBP11.56□□□□□ -0.56
DDX41-203ENST00000504781 ENGASEQ8NFI3 743 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
DDX41-203ENST00000504781 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 BIN2Q9UBW5 565 aaPredicted RBP11.56□□□□□ -0.56
DDX41-203ENST00000504781 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
DDX41-203ENST00000504781 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 ZBED4O75132 1171 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 ATP2B1P20020 1258 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 MARCKSP29966 332 aaPredicted RBP11.55□□□□□ -0.56
DDX41-203ENST00000504781 PRPHP41219 470 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 FKBP1BP68106 108 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
DDX41-203ENST00000504781 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 MKRN3Q13064 507 aaKnown RBP11.55□□□□□ -0.56
DDX41-203ENST00000504781 PTGDRQ13258 359 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 AP3B2Q13367 1082 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 DGKZQ13574 1117 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 MTMR2Q13614 643 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 ZSCAN23Q3MJ62 389 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 PPP4R3AQ6IN85 833 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 CATSPERGQ6ZRH7 1159 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 NEK8Q86SG6 692 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 RASAL3Q86YV0 1011 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 TIGD1Q96MW7 591 aa11.55□□□□□ -0.56
DDX41-203ENST00000504781 GZF1Q9H116 711 aaPredicted RBP11.55□□□□□ -0.56
DDX41-203ENST00000504781 RNF186Q9NXI6 227 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms