RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 MRPL11Q9Y3B7 192 aaKnown RBP13.03□□□□□ -0.32
TRIO-206ENST00000504606 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
TRIO-206ENST00000504606 ADAMTS3O15072 1205 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRIO-206ENST00000504606 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
TRIO-206ENST00000504606 PLS1Q14651 629 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 TMEM132BQ14DG7 1078 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 CYP4F22Q6NT55 531 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 LBX2Q6XYB7 198 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 BRAPQ7Z569 592 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 MB21D1Q8N884 522 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 RASGRP4Q8TDF6 673 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 PSTPIP2Q9H939 334 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
TRIO-206ENST00000504606 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.33
TRIO-206ENST00000504606 ATP2A1O14983 1001 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 CYP2C8P10632 490 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 UBE2SQ16763 222 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
TRIO-206ENST00000504606 NOSTRINQ8IVI9 506 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
TRIO-206ENST00000504606 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
TRIO-206ENST00000504606 TNFRSF25Q93038 417 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 CHAMP1Q96JM3 812 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 PTPN18Q99952 460 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 BTBD7Q9P203 1132 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
TRIO-206ENST00000504606 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 SMCHD1A6NHR9 2005 aa13.01□□□□□ -0.33
TRIO-206ENST00000504606 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
TRIO-206ENST00000504606 RASSF10A6NK89 507 aa13□□□□□ -0.33
TRIO-206ENST00000504606 M0R2N6 131 aa13□□□□□ -0.33
TRIO-206ENST00000504606 PEX10O60683 326 aa13□□□□□ -0.33
TRIO-206ENST00000504606 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
TRIO-206ENST00000504606 STAT3P40763 770 aa13□□□□□ -0.33
TRIO-206ENST00000504606 INHBEP58166 350 aa13□□□□□ -0.33
TRIO-206ENST00000504606 DNM1Q05193 864 aaKnown RBP13□□□□□ -0.33
TRIO-206ENST00000504606 SREBF2Q12772 1141 aa13□□□□□ -0.33
TRIO-206ENST00000504606 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
TRIO-206ENST00000504606 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
TRIO-206ENST00000504606 JAKMIP3Q5VZ66 844 aa13□□□□□ -0.33
TRIO-206ENST00000504606 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
TRIO-206ENST00000504606 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
TRIO-206ENST00000504606 PIK3AP1Q6ZUJ8 805 aa13□□□□□ -0.33
TRIO-206ENST00000504606 KRT25Q7Z3Z0 450 aa13□□□□□ -0.33
TRIO-206ENST00000504606 GTF3C2Q8WUA4 911 aaPredicted RBP13□□□□□ -0.33
TRIO-206ENST00000504606 TRERF1Q96PN7 1200 aa13□□□□□ -0.33
TRIO-206ENST00000504606 GBP4Q96PP9 640 aa13□□□□□ -0.33
TRIO-206ENST00000504606 PARK7Q99497 189 aaKnown RBP13□□□□□ -0.33
TRIO-206ENST00000504606 RNF146Q9NTX7 359 aa13□□□□□ -0.33
TRIO-206ENST00000504606 RIPK3Q9Y572 518 aa13□□□□□ -0.33
TRIO-206ENST00000504606 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRIO-206ENST00000504606 NFIBO00712 420 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 MEIS2O14770 477 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 OPLAHO14841 1288 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 CNMDO75829 334 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 CFBP00751 764 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 NCLP19338 710 aaKnown RBP12.99□□□□□ -0.33
TRIO-206ENST00000504606 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
TRIO-206ENST00000504606 TKFCQ3LXA3 575 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 EARS2Q5JPH6 523 aaKnown RBP12.99□□□□□ -0.33
TRIO-206ENST00000504606 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 CLEC4DQ8WXI8 215 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
TRIO-206ENST00000504606 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 RBPJLQ9UBG7 517 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 NOL7Q9UMY1 257 aaKnown RBP12.99□□□□□ -0.33
TRIO-206ENST00000504606 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
TRIO-206ENST00000504606 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
TRIO-206ENST00000504606 POLR2MP0CAP2 368 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
TRIO-206ENST00000504606 GCLCP48506 637 aaPredicted RBP12.98□□□□□ -0.33
TRIO-206ENST00000504606 KRT85P78386 507 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 NOGQ13253 232 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 NONOQ15233 471 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRIO-206ENST00000504606 RILPL1Q5EBL4 403 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 IFNL1Q8IU54 200 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 RIOX2Q8IUF8 465 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 CAPNS2Q96L46 248 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 ZIC5Q96T25 663 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 ACAD9Q9H845 621 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 TXNRD2Q9NNW7 524 aa12.98□□□□□ -0.33
TRIO-206ENST00000504606 ZCCHC17Q9NP64 241 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms