RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TPCN1Q9ULQ1 816 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 PHF20L1A8MW92 1017 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 NCAM2O15394 837 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 ARAFP10398 606 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 PFKPQ01813 784 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 ASIC2Q16515 512 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 MAP1SQ66K74 1059 aaPredicted RBP6.13□□□□□ -1.43
NIPBL-204ENST00000504430 OR6P1Q8NGX9 317 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 KIAA1191Q96A73 305 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 SLC2A13Q96QE2 648 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 WASHC2AQ641Q2 1341 aa6.13□□□□□ -1.43
NIPBL-204ENST00000504430 LTFP02788 710 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 HOXD12P35452 270 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 AK2P54819 239 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 PRSS53Q2L4Q9 553 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 NBPF10Q6P3W6 841 aaKnown RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ZBTB34Q8NCN2 500 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 MARVELD3Q96A59 401 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ITPKCQ96DU7 683 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 CHCHD6Q9BRQ6 235 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 KIAA1586Q9HCI6 787 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ITM2CQ9NQX7 267 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 SPTLC3Q9NUV7 552 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ABCF2Q9UG63 623 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 A0A087WZG4 1122 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 TRIM64A6NGJ6 449 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 TRIM64BA6NI03 449 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 RTCAO00442 366 aaKnown RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 BRINP1O60477 761 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ARIH2O95376 493 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ADH1AP07327 375 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 RAC2P15153 192 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 TUBP50607 506 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ZNF132P52740 706 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 SCAND1P57086 179 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 GJA9P57773 515 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ERVK-21P61565 698 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 INPP5AQ14642 412 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ERICH6BQ5W0A0 696 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 NLRP13Q86W25 1043 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 NAXEQ8NCW5 288 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 PPP1R35Q8TAP8 253 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 NLRP3Q96P20 1036 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 MYD88Q99836 296 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 POLHQ9Y253 713 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 PCDHA9Q9Y5H5 950 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 SYNRGQ9UMZ2 1314 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 K7ENM7 598 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ZKSCAN1P17029 563 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 FGFR4P22455 802 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ZC3H12BQ5HYM0 836 aaKnown RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 HIBCHQ6NVY1 386 aaPredicted RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ENOSF1Q7L5Y1 443 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 TGFBRAP1Q8WUH2 860 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 WNT2BQ93097 391 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 OSBP2Q969R2 916 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 CAMKK2Q96RR4 588 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 UNKQ9C0B0 810 aaKnown RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 CEP44Q9C0F1 390 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 ZNF112Q9UJU3 913 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 LRRFIP2Q9Y608 721 aaKnown RBP6.12□□□□□ -1.43
NIPBL-204ENST00000504430 SNCAIPQ9Y6H5 919 aa6.12□□□□□ -1.43
NIPBL-204ENST00000504430 GOLGA8CPA6NN73 597 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 TLR5O60602 858 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 RHCEP18577 417 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ABCB4P21439 1286 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 CNTFP26441 200 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 RHDQ02161 417 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 DHX9Q08211 1270 aaKnown RBP6.11□□□□□ -1.43
NIPBL-204ENST00000504430 PLCB4Q15147 1175 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 NUTM2GQ5VZR2 741 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 B3GNT9Q6UX72 402 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 C11orf74Q86VG3 221 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 LILRB1Q8NHL6 650 aaPredicted RBP6.11□□□□□ -1.43
NIPBL-204ENST00000504430 TMEM40Q8WWA1 233 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 BRF1Q92994 677 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ATG4CQ96DT6 458 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 TAAR9Q96RI9 348 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 REV1Q9UBZ9 1251 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ASXL2Q76L83 1435 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 A0A096LPE4 126 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 PABPC1P11940 636 aaKnown RBP6.11□□□□□ -1.43
NIPBL-204ENST00000504430 DHCR24Q15392 516 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 SLC27A3Q5K4L6 730 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 IFIT1BQ5T764 474 aaKnown RBP6.11□□□□□ -1.43
NIPBL-204ENST00000504430 MFSD4BQ5TF39 518 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 GALNT17Q6IS24 598 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 NSMFQ6X4W1 530 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 PNMA5Q96PV4 448 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ZNF576Q9H609 170 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 ZFAND3Q9H8U3 227 aa6.11□□□□□ -1.43
NIPBL-204ENST00000504430 INTS7Q9NVH2 962 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms