RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 KLC4Q9NSK0 619 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 TMOD3Q9NYL9 352 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 KIAA0586Q9BVV6 1533 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 STXBP3O00186 592 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 E2F3O00716 465 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 SPTLC2O15270 562 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 KLHL41O60662 606 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 SCG2P13521 617 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 MYBPC3Q14896 1274 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 ZBTB8BQ8NAP8 495 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 SNX21Q969T3 373 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 FERMT2Q96AC1 680 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 IL17RAQ96F46 866 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 MRPL9Q9BYD2 267 aaKnown RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 CBY1Q9Y3M2 126 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 MAP3K1Q13233 1512 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 EIF3FO00303 357 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 PDE5AO76074 875 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 SEMA3DO95025 777 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 GUCA1CO95843 209 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 AGR2O95994 175 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 PNMA6AP0CW24 399 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 ZNF3P17036 446 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 TTC25Q96NG3 672 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 MRPL46Q9H2W6 279 aaKnown RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 USP40Q9NVE5 1235 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 ZBTB1Q9Y2K1 713 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 SPDYE5A6NIY4 337 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 POLR2EP19388 210 aaKnown RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 C14orf80Q86SX3 495 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 OSCP1Q8WVF1 389 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 RBM17Q96I25 401 aaKnown RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 KIFC3Q9BVG8 833 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 MRPS23Q9Y3D9 190 aaKnown RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 A6NNZ2 444 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 MAN1A2O60476 641 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 CALCOCO2Q13137 446 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 G3BP1Q13283 466 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 KLHL40Q2TBA0 621 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 TUBB8Q3ZCM7 444 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 RCSD1Q6JBY9 416 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 RBM41Q96IZ5 413 aaKnown RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 FOXP3Q9BZS1 431 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 PLB1Q6P1J6 1458 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 TLDC2A0PJX2 215 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SEC31AO94979 1220 aaKnown RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 TNFAIP3P21580 790 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 S100A5P33763 92 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 COTL1Q14019 142 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SEMA3AQ14563 771 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 PPP6R3Q5H9R7 873 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 ADALQ6DHV7 355 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SRGAP1Q7Z6B7 1085 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC83Q8IWF9 413 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 POMGNT1Q8WZA1 660 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 LMCD1Q9NZU5 365 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 AGTPBP1Q9UPW5 1226 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 INO80B-WBP1J3KQ70 363 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 NPPAP01160 153 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 RPN1P04843 607 aaKnown RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 EPB41P11171 864 aaKnown RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 EEF2P13639 858 aaKnown RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 ZNF16P17020 682 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SFPQP23246 707 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 KRT17Q04695 432 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 ESCO1Q5FWF5 840 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 KRT74Q7RTS7 529 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 ZNF554Q86TJ5 538 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 RNF169Q8NCN4 708 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 KCNB2Q92953 911 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 TTC17Q96AE7 1141 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 CHMP1AQ9HD42 196 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 MAD1L1Q9Y6D9 718 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC169A6NNP5 214 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 OPHN1O60890 802 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SLC16A2P36021 539 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 UBXN1Q04323 297 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 KIAA1958Q8N8K9 716 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 PRDM5Q9NQX1 630 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-204ENST00000504131 UACAQ9BZF9 1416 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 NOTOA8MTQ0 251 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 RAP1GDS1P52306 607 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 MYO1EQ12965 1108 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 NDUFA5Q16718 116 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 ERICH5Q6P6B1 374 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 TXNDC2Q86VQ3 553 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 SDF4Q9BRK5 362 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 VRTNQ9H8Y1 702 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 PARVGQ9HBI0 331 aa6.82□□□□□ -1.32
CLCN3-204ENST00000504131 ERICH2A1L162 156 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 WDR91A4D1P6 747 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 CDC27P30260 824 aa6.81□□□□□ -1.32
CLCN3-204ENST00000504131 PMS1P54277 932 aaKnown RBP6.81□□□□□ -1.32
CLCN3-204ENST00000504131 KRT76Q01546 638 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms