RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 ADGRF1Q5T601 910 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 SLCO6A1Q86UG4 719 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 MCF2L2Q86YR7 1114 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 FBXO15Q8NCQ5 510 aaPredicted RBP6.44□□□□□ -1.38
RFC1-205ENST00000502991 JMJD8Q96S16 334 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 SLC6A17Q9H1V8 727 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 WHRNQ9P202 907 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 TNFRSF10DQ9UBN6 386 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 APEX2Q9UBZ4 518 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 STRIP2Q9ULQ0 834 aa6.44□□□□□ -1.38
RFC1-205ENST00000502991 MYOCOSA0A1B0GUC4 107 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 STXBP3O00186 592 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 FGRP09769 529 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 C1QTNF9P0C862 333 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 BMS1Q14692 1282 aaKnown RBP6.43□□□□□ -1.38
RFC1-205ENST00000502991 SNX17Q15036 470 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 PKN1Q16512 942 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 CCDC181Q5TID7 509 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 LARP1BQ659C4 914 aaKnown RBP6.43□□□□□ -1.38
RFC1-205ENST00000502991 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 NAT16Q8N8M0 369 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 ZCRB1Q8TBF4 217 aaKnown RBP6.43□□□□□ -1.38
RFC1-205ENST00000502991 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.43□□□□□ -1.38
RFC1-205ENST00000502991 SGPP1Q9BX95 441 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 CGGBP1Q9UFW8 167 aaPredicted RBP6.43□□□□□ -1.38
RFC1-205ENST00000502991 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
RFC1-205ENST00000502991 TAF6LQ9Y6J9 622 aa6.43□□□□□ -1.38
RFC1-205ENST00000502991 ARID1BQ8NFD5 2236 aaPredicted RBP6.42□□□□□ -1.38
RFC1-205ENST00000502991 PLEKHD1A6NEE1 506 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 CLSTN1O94985 981 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 MSL3P1P0C860 447 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 PRKCAP17252 672 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 ANAPC15P60006 121 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 NFE2L2Q16236 605 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 RNF187Q5TA31 235 aaPredicted RBP6.42□□□□□ -1.38
RFC1-205ENST00000502991 C6orf15Q6UXA7 325 aaPredicted RBP6.42□□□□□ -1.38
RFC1-205ENST00000502991 NUP43Q8NFH3 380 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 MCOLN1Q9GZU1 580 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 GBP3Q9H0R5 595 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 KLHL42Q9P2K6 505 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 IMPACTQ9P2X3 320 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 SUGT1Q9Y2Z0 365 aa6.42□□□□□ -1.38
RFC1-205ENST00000502991 SF3B6Q9Y3B4 125 aaKnown RBP6.42□□□□□ -1.38
RFC1-205ENST00000502991 ETV2O00321 342 aaPredicted RBP6.41□□□□□ -1.38
RFC1-205ENST00000502991 FGF10O15520 208 aaPredicted RBP6.41□□□□□ -1.38
RFC1-205ENST00000502991 PPM1BO75688 479 aa6.41□□□□□ -1.38
RFC1-205ENST00000502991 POU4F1Q01851 419 aa6.41□□□□□ -1.38
RFC1-205ENST00000502991 GALNT18Q6P9A2 607 aa6.41□□□□□ -1.38
RFC1-205ENST00000502991 IRF2BP1Q8IU81 584 aa6.41□□□□□ -1.38
RFC1-205ENST00000502991 ZNF513Q8N8E2 541 aaPredicted RBP6.41□□□□□ -1.38
RFC1-205ENST00000502991 ZNF408Q9H9D4 720 aa6.41□□□□□ -1.38
RFC1-205ENST00000502991 DIS3Q9Y2L1 958 aaKnown RBP6.41□□□□□ -1.38
RFC1-205ENST00000502991 RIPOR2Q9Y4F9 1068 aa6.41□□□□□ -1.38
RFC1-205ENST00000502991 MRPL42Q9Y6G3 142 aaKnown RBP6.41□□□□□ -1.38
RFC1-205ENST00000502991 A0A087WZG4 1122 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 KCNH1O95259 989 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 NOP2P46087 812 aaKnown RBP6.4□□□□□ -1.38
RFC1-205ENST00000502991 JAG1P78504 1218 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 ARHGEF39Q8N4T4 335 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 KCNN1Q92952 543 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 MRFAP1L1Q96HT8 127 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 ZNF552Q9H707 407 aaPredicted RBP6.4□□□□□ -1.38
RFC1-205ENST00000502991 ACTR10Q9NZ32 417 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 AKT3Q9Y243 479 aa6.4□□□□□ -1.38
RFC1-205ENST00000502991 A0A1W2PQ45 241 aaPredicted RBP6.39□□□□□ -1.39
RFC1-205ENST00000502991 A0A1W2PQY0 241 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 OR14I1A6ND48 311 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 WTIPA6NIX2 430 aaPredicted RBP6.39□□□□□ -1.39
RFC1-205ENST00000502991 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 PNLIPP16233 465 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 TACR1P25103 407 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 RAP1GAPP47736 663 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 MVKQ03426 396 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 NBPF6Q5VWK0 638 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 JAMLQ86YT9 394 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 CILP2Q8IUL8 1156 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 NBPF4Q96M43 638 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 PTCHD1Q96NR3 888 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 PSMD1Q99460 953 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 CRTAC1Q9NQ79 661 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 PRKAG3Q9UGI9 489 aa6.39□□□□□ -1.39
RFC1-205ENST00000502991 LOC102724159A0A0B4J2E5 919 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 NUDT19A8MXV4 375 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 NPIPB6E9PJ23 425 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 NFIBO00712 420 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 ENPP3O14638 875 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 AURKAO14965 403 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 DDAH1O94760 285 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 TSPAN15O95858 294 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 ENDOUP21128 410 aaKnown RBP6.38□□□□□ -1.39
RFC1-205ENST00000502991 CYP4F8P98187 520 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 AMPD2Q01433 879 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 PWP2Q15269 919 aaKnown RBP6.38□□□□□ -1.39
RFC1-205ENST00000502991 HLA-DQA1Q5Y7H0 255 aa6.38□□□□□ -1.39
RFC1-205ENST00000502991 MRM1Q6IN84 353 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms