RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 EYSQ5T1H1 3165 aa21.92■■□□□ 1.1
PRKCB-209ENST00000498058 ELP1O95163 1332 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 DCDC2CA8MYV0 355 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 SMAD3P84022 425 aaKnown RBP21.91■■□□□ 1.1
PRKCB-209ENST00000498058 AAMPQ13685 434 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 GNASQ5JWF2 1037 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 GLT1D1Q96MS3 346 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 CDX2Q99626 313 aaPredicted RBP21.91■■□□□ 1.1
PRKCB-209ENST00000498058 TMEM47Q9BQJ4 181 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 CYP39A1Q9NYL5 469 aa21.91■■□□□ 1.1
PRKCB-209ENST00000498058 HAND2P61296 217 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 TNFAIP2Q03169 654 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 FPGSQ05932 587 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 CCDC96Q2M329 555 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 RRP12Q5JTH9 1297 aaKnown RBP21.9■■□□□ 1.1
PRKCB-209ENST00000498058 PPP4R3BQ5MIZ7 849 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 TAPT1Q6NXT6 567 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 BTNL9Q6UXG8 535 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 C16orf59Q7L2K0 433 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 PCSK9Q8NBP7 692 aaKnown RBP21.9■■□□□ 1.1
PRKCB-209ENST00000498058 DCAF4Q8WV16 495 aa21.9■■□□□ 1.1
PRKCB-209ENST00000498058 RNPC3Q96LT9 517 aaKnown RBP21.9■■□□□ 1.1
PRKCB-209ENST00000498058 RANBP17Q9H2T7 1088 aaKnown RBP21.9■■□□□ 1.1
PRKCB-209ENST00000498058 ZBTB47Q9UFB7 747 aaPredicted RBP21.9■■□□□ 1.1
PRKCB-209ENST00000498058 FRMPD2Q68DX3 1309 aaPredicted RBP21.89■■□□□ 1.1
PRKCB-209ENST00000498058 ARVCFO00192 962 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 TIMP1P01033 207 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 SMPD1P17405 629 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 EEPD1Q7L9B9 569 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 FAM126BQ8IXS8 530 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 TOMM22Q9NS69 142 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 CCPG1Q9ULG6 757 aa21.89■■□□□ 1.09
PRKCB-209ENST00000498058 CDH23Q9H251 3354 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 ASB14A6NK59 587 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 ICAM1P05362 532 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 NSMFQ6X4W1 530 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 TBC1D10CQ8IV04 446 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 FBXO16Q8IX29 292 aaPredicted RBP21.88■■□□□ 1.09
PRKCB-209ENST00000498058 VTI1AQ96AJ9 217 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.88■■□□□ 1.09
PRKCB-209ENST00000498058 SPC25Q9HBM1 224 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 GPCPD1Q9NPB8 672 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 TCP11L1Q9NUJ3 509 aa21.88■■□□□ 1.09
PRKCB-209ENST00000498058 GRIN2DO15399 1336 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 A0A0U1RQG5 324 aaPredicted RBP21.87■■□□□ 1.09
PRKCB-209ENST00000498058 NFIBO00712 420 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 IGHDP01880 384 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 TOP1P11387 765 aaKnown RBP21.87■■□□□ 1.09
PRKCB-209ENST00000498058 SYDE2Q5VT97 1194 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 CXCL17Q6UXB2 119 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 TLK2Q86UE8 772 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 SMC5Q8IY18 1101 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 MORC4Q8TE76 937 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 MYLIPQ8WY64 445 aa21.87■■□□□ 1.09
PRKCB-209ENST00000498058 ZMYM6O95789 1325 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 CCDC171Q6TFL3 1326 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 TRIM6-TRIM34B2RNG4 842 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 DYNC1LI2O43237 492 aaPredicted RBP21.86■■□□□ 1.09
PRKCB-209ENST00000498058 CD4P01730 458 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 IRX6P78412 446 aaPredicted RBP21.86■■□□□ 1.09
PRKCB-209ENST00000498058 BAATQ14032 418 aaPredicted RBP21.86■■□□□ 1.09
PRKCB-209ENST00000498058 MFSD5Q6N075 450 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 NOL8Q76FK4 1167 aaKnown RBP21.86■■□□□ 1.09
PRKCB-209ENST00000498058 SLC43A3Q8NBI5 491 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 RILPL2Q969X0 211 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 PRUNE2Q8WUY3 3088 aa21.86■■□□□ 1.09
PRKCB-209ENST00000498058 MROH7Q68CQ1 1323 aa21.85■■□□□ 1.09
PRKCB-209ENST00000498058 PDHBP11177 359 aa21.85■■□□□ 1.09
PRKCB-209ENST00000498058 PLEKHM2Q8IWE5 1019 aa21.85■■□□□ 1.09
PRKCB-209ENST00000498058 CLEC4DQ8WXI8 215 aa21.85■■□□□ 1.09
PRKCB-209ENST00000498058 PPP1R12CQ9BZL4 782 aa21.85■■□□□ 1.09
PRKCB-209ENST00000498058 CUL9Q8IWT3 2517 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 NEDD4P46934 1319 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 ACRP10323 421 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 CSF2RAP15509 400 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 SDSP20132 328 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 FSCN1Q16658 493 aaKnown RBP21.84■■□□□ 1.09
PRKCB-209ENST00000498058 TMEM240Q5SV17 173 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 AKNAD1Q5T1N1 836 aa21.84■■□□□ 1.09
PRKCB-209ENST00000498058 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.84■■□□□ 1.094e-6■■■■■ 36.3
PRKCB-209ENST00000498058 UMODL1Q5DID0 1318 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 SNHG28P0DPA3 235 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 CYP2C18P33260 490 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 ALDH5A1P51649 535 aaPredicted RBP21.83■■□□□ 1.09
PRKCB-209ENST00000498058 PSMC6P62333 389 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 ZNF543Q08ER8 600 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 IQSEC1Q6DN90 963 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 SLC30A10Q6XR72 485 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 TICAM2Q86XR7 235 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 ZKSCAN3Q9BRR0 538 aa21.83■■□□□ 1.09
PRKCB-209ENST00000498058 GRXCR1A8MXD5 290 aa21.82■■□□□ 1.08
PRKCB-209ENST00000498058 RASIP1Q5U651 963 aa21.82■■□□□ 1.08
PRKCB-209ENST00000498058 MFSD6Q6ZSS7 791 aa21.82■■□□□ 1.08
PRKCB-209ENST00000498058 EXOC6Q8TAG9 804 aa21.82■■□□□ 1.08
PRKCB-209ENST00000498058 COL25A1Q9BXS0 654 aaPredicted RBP21.82■■□□□ 1.08
PRKCB-209ENST00000498058 CPVLQ9H3G5 476 aa21.82■■□□□ 1.08
PRKCB-209ENST00000498058 LAMA4Q16363 1823 aa21.82■■□□□ 1.08
PRKCB-209ENST00000498058 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.81■■□□□ 1.08
PRKCB-209ENST00000498058 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms