RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SOWAHBA6NEL2 793 aa19.76■□□□□ 0.75
VIM-208ENST00000497849 DYNC1LI2O43237 492 aaPredicted RBP19.76■□□□□ 0.75
VIM-208ENST00000497849 RASA1P20936 1047 aa19.76■□□□□ 0.75
VIM-208ENST00000497849 TMEM63BQ5T3F8 832 aa19.76■□□□□ 0.75
VIM-208ENST00000497849 ALYREFQ86V81 257 aaKnown RBP19.76■□□□□ 0.75
VIM-208ENST00000497849 DDX49Q9Y6V7 483 aaKnown RBP19.76■□□□□ 0.75
VIM-208ENST00000497849 PFKMP08237 780 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 RLBP1P12271 317 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 OAZ1P54368 228 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 TAP1Q03518 808 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 ARNTL2Q8WYA1 636 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 ALDH8A1Q9H2A2 487 aaPredicted RBP19.75■□□□□ 0.75
VIM-208ENST00000497849 PDGFCQ9NRA1 345 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 HOMER2Q9NSB8 354 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 PAG1Q9NWQ8 432 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 CTDP1Q9Y5B0 961 aaPredicted RBP19.75■□□□□ 0.75
VIM-208ENST00000497849 SLC4A4Q9Y6R1 1079 aa19.75■□□□□ 0.75
VIM-208ENST00000497849 COL4A4P53420 1690 aaPredicted RBP19.75■□□□□ 0.75
VIM-208ENST00000497849 PI4K2BG5E9Z4 385 aa19.74■□□□□ 0.75
VIM-208ENST00000497849 CYP2C9P11712 490 aa19.74■□□□□ 0.75
VIM-208ENST00000497849 DEFB128Q7Z7B8 93 aa19.74■□□□□ 0.75
VIM-208ENST00000497849 ITPRIPQ8IWB1 547 aa19.74■□□□□ 0.75
VIM-208ENST00000497849 AP5M1Q9H0R1 490 aa19.74■□□□□ 0.75
VIM-208ENST00000497849 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
VIM-208ENST00000497849 TRMT13Q9NUP7 481 aaKnown RBP19.74■□□□□ 0.75
VIM-208ENST00000497849 PTPRSQ13332 1948 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 ZEB2O60315 1214 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 LPXNO60711 386 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 GRB10Q13322 594 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 TAPT1Q6NXT6 567 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 SPRED2Q7Z698 418 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 DDRGK1Q96HY6 314 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 SLC9A7Q96T83 725 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 CLIP2Q9UDT6 1046 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 FEM1BQ9UK73 627 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 TET1Q8NFU7 2136 aa19.73■□□□□ 0.75
VIM-208ENST00000497849 LCTP09848 1927 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 IGKV6D-41A0A0C4DH26 115 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 ASB14A6NK59 587 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 UBE3CQ15386 1083 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 STK11IPQ8N1F8 1099 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 CLASRPQ8N2M8 674 aaKnown RBP19.72■□□□□ 0.75
VIM-208ENST00000497849 PUS7LQ9H0K6 701 aaKnown RBP19.72■□□□□ 0.75
VIM-208ENST00000497849 ACAD9Q9H845 621 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 ARPP21Q9UBL0 812 aaPredicted RBP19.72■□□□□ 0.75
VIM-208ENST00000497849 Q9Y3F1 56 aa19.72■□□□□ 0.75
VIM-208ENST00000497849 IQSEC1Q6DN90 963 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 PHOSPHO2Q8TCD6 241 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 MKL1Q969V6 931 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.71■□□□□ 0.75
VIM-208ENST00000497849 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 ZNF536O15090 1300 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 TNKSO95271 1327 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 TANC1Q9C0D5 1861 aa19.71■□□□□ 0.75
VIM-208ENST00000497849 IFIT2P09913 472 aaKnown RBP19.7■□□□□ 0.74
VIM-208ENST00000497849 ACTN1P12814 892 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 SBK1Q52WX2 424 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 HSP90AB4PQ58FF6 505 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 EEPD1Q7L9B9 569 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 HERC6Q8IVU3 1022 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 FBXO16Q8IX29 292 aaPredicted RBP19.7■□□□□ 0.74
VIM-208ENST00000497849 FTSJ3Q8IY81 847 aaKnown RBP19.7■□□□□ 0.74
VIM-208ENST00000497849 MKNK2Q9HBH9 465 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 RNF146Q9NTX7 359 aa19.7■□□□□ 0.74
VIM-208ENST00000497849 SUPT20HL2P0C7V6 817 aa19.69■□□□□ 0.74
VIM-208ENST00000497849 COG6Q9Y2V7 657 aa19.69■□□□□ 0.74
VIM-208ENST00000497849 SCN10AQ9Y5Y9 1956 aa19.68■□□□□ 0.74
VIM-208ENST00000497849 PRR33A8MZF0 331 aa19.68■□□□□ 0.74
VIM-208ENST00000497849 LRRC47Q8N1G4 583 aaKnown RBP19.68■□□□□ 0.74
VIM-208ENST00000497849 GMCL1P1Q8NEA9 526 aa19.68■□□□□ 0.74
VIM-208ENST00000497849 KIF1BPQ96EK5 621 aa19.68■□□□□ 0.74
VIM-208ENST00000497849 CEP95Q96GE4 821 aa19.68■□□□□ 0.74
VIM-208ENST00000497849 HAUS7Q99871 368 aa19.68■□□□□ 0.74
VIM-208ENST00000497849 IQCF3P0C7M6 154 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 FDX1P10109 184 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 BMP3P12645 472 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 ATP5JP18859 108 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 RFC2P35250 354 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 PURAQ00577 322 aaKnown RBP19.67■□□□□ 0.74
VIM-208ENST00000497849 RPAP2Q8IXW5 612 aaPredicted RBP19.67■□□□□ 0.74
VIM-208ENST00000497849 TRERF1Q96PN7 1200 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 PURBQ96QR8 312 aaKnown RBP19.67■□□□□ 0.74
VIM-208ENST00000497849 STRBPQ96SI9 672 aaKnown RBP19.67■□□□□ 0.74
VIM-208ENST00000497849 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 MTMR4Q9NYA4 1195 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 SYNPO2Q9UMS6 1093 aa19.67■□□□□ 0.74
VIM-208ENST00000497849 LCHNA4D1U4 455 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 GSG1L2A8MUP6 293 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 MINDY4BA8MYZ0 360 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 KIF28PB7ZC32 967 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 TMEM232C9JQI7 657 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 DUSP28Q4G0W2 176 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 SLFN13Q68D06 897 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 MORC4Q8TE76 937 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 VTA1Q9NP79 307 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 TRIP12Q14669 1992 aaPredicted RBP19.66■□□□□ 0.74
VIM-208ENST00000497849 WDFY4Q6ZS81 3184 aa19.66■□□□□ 0.74
VIM-208ENST00000497849 PRDM1O75626 825 aa19.65■□□□□ 0.74
VIM-208ENST00000497849 TKFCQ3LXA3 575 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms