RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 LDHDQ86WU2 507 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 ERO1BQ86YB8 467 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 RRAGCQ9HB90 399 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 PPP1R9AQ9ULJ8 1098 aa27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 MRPL11Q9Y3B7 192 aaKnown RBP27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 SRPRBQ9Y5M8 271 aaKnown RBP27.8■■■□□ 2.04
PPP1R3F-205ENST00000495799 UNCXA6NJT0 531 aa27.79■■■□□ 2.04
PPP1R3F-205ENST00000495799 HMGCS2P54868 508 aa27.79■■■□□ 2.04
PPP1R3F-205ENST00000495799 FAM160A1Q05DH4 1040 aa27.79■■■□□ 2.04
PPP1R3F-205ENST00000495799 CCDC174Q6PII3 467 aa27.79■■■□□ 2.04
PPP1R3F-205ENST00000495799 ZNF579Q8NAF0 562 aaKnown RBP27.79■■■□□ 2.04
PPP1R3F-205ENST00000495799 NAP1L4Q99733 375 aaKnown RBP27.79■■■□□ 2.04
PPP1R3F-205ENST00000495799 ATP2C1P98194 919 aaPredicted RBP27.78■■■□□ 2.04
PPP1R3F-205ENST00000495799 SAMD1Q6SPF0 538 aaPredicted RBP27.78■■■□□ 2.04
PPP1R3F-205ENST00000495799 DACT1Q9NYF0 836 aa27.78■■■□□ 2.04
PPP1R3F-205ENST00000495799 FBXO2Q9UK22 296 aaPredicted RBP27.78■■■□□ 2.04
PPP1R3F-205ENST00000495799 LAD1O00515 517 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 ZBED4O75132 1171 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 FOSP01100 380 aaPredicted RBP27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 ICAM1P05362 532 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 MCM7P33993 719 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 ZNF445P59923 1031 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 ARL6IP4Q66PJ3 421 aaKnown RBP27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 TBCKQ8TEA7 893 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 NUP62CLQ9H1M0 184 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 TMEM260Q9NX78 707 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 UBE2SQ16763 222 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 ELP3Q9H9T3 547 aa27.77■■■□□ 2.04
PPP1R3F-205ENST00000495799 PARP14Q460N5 1801 aa27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 SPDYE5A6NIY4 337 aa27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 PTGDRQ13258 359 aa27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 MAP1SQ66K74 1059 aaPredicted RBP27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 SLC38A10Q9HBR0 1119 aa27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 FAM13BQ9NYF5 915 aa27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 MYPNQ86TC9 1320 aa27.76■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L15C9J2P7 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L13C9JLJ4 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L11C9JVI0 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L18D6R9N7 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L22D6RA61 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L17D6RBQ6 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L19D6RCP7 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L20D6RJB6 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 PIK3CDO00329 1044 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 CXCL11O14625 94 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 KINO60870 393 aaKnown RBP27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 NR1I2O75469 434 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L24Q0WX57 530 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 DGKZQ13574 1117 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 LETM2Q2VYF4 491 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 RESP18Q5W5W9 173 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 GOLPH3LQ9H4A5 285 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 CCPG1Q9ULG6 757 aa27.75■■■□□ 2.03
PPP1R3F-205ENST00000495799 WNT7AO00755 349 aa27.74■■■□□ 2.03
PPP1R3F-205ENST00000495799 FKBP1BP68106 108 aa27.74■■■□□ 2.03
PPP1R3F-205ENST00000495799 PPIL2Q13356 520 aa27.74■■■□□ 2.03
PPP1R3F-205ENST00000495799 CLSTN2Q9H4D0 955 aa27.74■■■□□ 2.03
PPP1R3F-205ENST00000495799 SRCAPQ6ZRS2 3230 aa27.74■■■□□ 2.03
PPP1R3F-205ENST00000495799 PTPRFP10586 1907 aa27.74■■■□□ 2.03
PPP1R3F-205ENST00000495799 FAM237AA0A1B0GTK4 181 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 A0A1B0GVL5 298 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 SPDYE3A6NKU9 549 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 CTAGE5O15320 804 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 CCNT1O60563 726 aaKnown RBP27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 POTEIP0CG38 1075 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 POTEJP0CG39 1038 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 COG2Q14746 738 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 CATSPERGQ6ZRH7 1159 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 ENGASEQ8NFI3 743 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 ANO3Q9BYT9 981 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 LOC285556D6RIA3 1793 aa27.73■■■□□ 2.03
PPP1R3F-205ENST00000495799 MEIS2O14770 477 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 GCFC2P16383 781 aaKnown RBP27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 SHC4Q6S5L8 630 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 PROCA1Q8NCQ7 364 aaPredicted RBP27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 OTUD5Q96G74 571 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 CLIC6Q96NY7 704 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 TNMDQ9H2S6 317 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 EHMT1Q9H9B1 1298 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 GCOM1H8Y6P7 765 aaPredicted RBP27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 NEMFO60524 1076 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 POLR2MP0CAP2 368 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 PFKFB1P16118 471 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 DSG3P32926 999 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 PRPHP41219 470 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 LDLRAD1Q5T700 205 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 USP17L6PQ6QN14 398 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 FMR1NBQ8N0W7 255 aaPredicted RBP27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 SAMD3Q8N6K7 520 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 HOXC10Q9NYD6 342 aa27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.72■■■□□ 2.03
PPP1R3F-205ENST00000495799 ZNF536O15090 1300 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 SYCE3A1L190 88 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 NDUFA8P51970 172 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 OAZ1P54368 228 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 SNW1Q13573 536 aaKnown RBP27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 MOB2Q70IA6 237 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 MCF2L2Q86YR7 1114 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 HPSEQ9Y251 543 aa27.71■■■□□ 2.03
PPP1R3F-205ENST00000495799 A0A0G2JLL6 359 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms