RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
CALD1-222ENST00000495522 MRPL44Q9H9J2 332 aaKnown RBP17.25■□□□□ 0.35
CALD1-222ENST00000495522 IGKV6D-41A0A0C4DH26 115 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 TRIM37O94972 964 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 CREBRFQ8IUR6 639 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 THAP9Q9H5L6 903 aa17.24■□□□□ 0.35
CALD1-222ENST00000495522 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
CALD1-222ENST00000495522 FRMPD2Q68DX3 1309 aaPredicted RBP17.24■□□□□ 0.35
CALD1-222ENST00000495522 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 AKR1B1P15121 316 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 EEF1GP26641 437 aaKnown RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 JAKMIP3Q5VZ66 844 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 IRF2BP1Q8IU81 584 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 TMTC1Q8IUR5 882 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 UBXN4Q92575 508 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 ZC3H12CQ9C0D7 883 aaKnown RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 EFCAB8A8MWE9 144 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 TADA3O75528 432 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 SNHG28P0DPA3 235 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 H2AFXP16104 143 aaPredicted RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 MAP3K9P80192 1104 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 UBXN1Q04323 297 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 CARD6Q9BX69 1037 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 ABHD10Q9NUJ1 306 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
CALD1-222ENST00000495522 TTF2Q9UNY4 1162 aaKnown RBP17.23■□□□□ 0.35
CALD1-222ENST00000495522 MYH8P13535 1937 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 TECP42680 631 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 ADCY7P51828 1080 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 ARHGAP29Q52LW3 1261 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
CALD1-222ENST00000495522 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 TRIM47Q96LD4 638 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 C7orf25Q9BPX7 421 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 TRIM9Q9C026 710 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 DDX4Q9NQI0 724 aaKnown RBP17.22■□□□□ 0.35
CALD1-222ENST00000495522 SERPINB13Q9UIV8 391 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 MRFAP1Q9Y605 127 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 C10orf71Q711Q0 1435 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 TTLL1O95922 423 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 PMS1P54277 932 aaKnown RBP17.22■□□□□ 0.35
CALD1-222ENST00000495522 AMPD3Q01432 767 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 USP40Q9NVE5 1235 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 TMEM260Q9NX78 707 aa17.22■□□□□ 0.35
CALD1-222ENST00000495522 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
CALD1-222ENST00000495522 LGALS16A8MUM7 142 aa17.21■□□□□ 0.35
CALD1-222ENST00000495522 TTI2Q6NXR4 508 aa17.21■□□□□ 0.35
CALD1-222ENST00000495522 CYP26C1Q6V0L0 522 aa17.21■□□□□ 0.35
CALD1-222ENST00000495522 LZTFL1Q9NQ48 299 aa17.21■□□□□ 0.35
CALD1-222ENST00000495522 KIF5CO60282 957 aa17.21■□□□□ 0.34
CALD1-222ENST00000495522 NPR1P16066 1061 aa17.21■□□□□ 0.34
CALD1-222ENST00000495522 PPP1R2P41236 205 aa17.21■□□□□ 0.34
CALD1-222ENST00000495522 ASIC1P78348 528 aa17.21■□□□□ 0.34
CALD1-222ENST00000495522 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.34
CALD1-222ENST00000495522 COA7Q96BR5 231 aa17.21■□□□□ 0.34
CALD1-222ENST00000495522 MMTAG2Q9BU76 263 aaKnown RBP17.21■□□□□ 0.34
CALD1-222ENST00000495522 A0A1W2PQC6 194 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 BICDL2A1A5D9 508 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 SRGNP10124 158 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
CALD1-222ENST00000495522 PDE4DQ08499 809 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 CALCRLQ16602 461 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 MB21D1Q8N884 522 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
CALD1-222ENST00000495522 RNF225M0QZC1 329 aaPredicted RBP17.19■□□□□ 0.34
CALD1-222ENST00000495522 CCNE1P24864 410 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 KRT9P35527 623 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 TXKP42681 527 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■■□ 22.7
CALD1-222ENST00000495522 ERVK-24P63145 666 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 PPP2R3AQ06190 1150 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 TMEM266Q2M3C6 531 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 SHMT1P34896 483 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 CSGALNACT2Q8N6G5 542 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 ZNF507Q8TCN5 953 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 P2RX5Q93086 422 aa17.19■□□□□ 0.34
CALD1-222ENST00000495522 IRX2Q9BZI1 471 aaPredicted RBP17.19■□□□□ 0.34
CALD1-222ENST00000495522 ARGLU1Q9NWB6 273 aaPredicted RBP17.19■□□□□ 0.34
CALD1-222ENST00000495522 HLA-DOAP06340 250 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms