RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 GALNT17Q6IS24 598 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 PPP1R18Q6NYC8 613 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 BRAPQ7Z569 592 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 PTPN18Q99952 460 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 BRMS1Q9HCU9 246 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 RIC8AQ9NPQ8 531 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 TMEM260Q9NX78 707 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 CNPY2Q9Y2B0 182 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 CTDP1Q9Y5B0 961 aaPredicted RBP17.99■□□□□ 0.47
PHF1-211ENST00000495509 ATP6V1DQ9Y5K8 247 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 MYSM1Q5VVJ2 828 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 USP17L6PQ6QN14 398 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
PHF1-211ENST00000495509 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 ALAS1P13196 640 aa17.98■□□□□ 0.47
PHF1-211ENST00000495509 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
PHF1-211ENST00000495509 TOB1P50616 345 aaPredicted RBP17.98■□□□□ 0.47
PHF1-211ENST00000495509 CEBPZQ03701 1054 aaKnown RBP17.98■□□□□ 0.47
PHF1-211ENST00000495509 JAKMIP3Q5VZ66 844 aa17.98■□□□□ 0.47
PHF1-211ENST00000495509 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
PHF1-211ENST00000495509 HOMER2Q9NSB8 354 aa17.98■□□□□ 0.47
PHF1-211ENST00000495509 BTBD7Q9P203 1132 aa17.98■□□□□ 0.47
PHF1-211ENST00000495509 ZNF214Q9UL59 606 aaPredicted RBP17.98■□□□□ 0.47
PHF1-211ENST00000495509 MYPNQ86TC9 1320 aa17.98■□□□□ 0.47
PHF1-211ENST00000495509 FAM155AB1AL88 458 aaPredicted RBP17.97■□□□□ 0.47
PHF1-211ENST00000495509 PDHXO00330 501 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 MEIS2O14770 477 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 FDX1P10109 184 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 CYP2C8P10632 490 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 HERVK_113P62684 666 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 MUM1L1Q5H9M0 696 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 CUL5Q93034 780 aa17.97■□□□□ 0.47
PHF1-211ENST00000495509 SLC10A3P09131 477 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 ATP2B1P20020 1258 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.47
PHF1-211ENST00000495509 MRPL12P52815 198 aaKnown RBP17.96■□□□□ 0.47
PHF1-211ENST00000495509 PLS1Q14651 629 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 LBX2Q6XYB7 198 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 REXO1Q8N1G1 1221 aaKnown RBP17.96■□□□□ 0.47
PHF1-211ENST00000495509 PGBD1Q96JS3 809 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 USP28Q96RU2 1077 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
PHF1-211ENST00000495509 WNT7AO00755 349 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 OSBPP22059 807 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 CLK2P49760 499 aaKnown RBP17.96■□□□□ 0.47
PHF1-211ENST00000495509 PABPC4Q13310 644 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■□□□□ 10.1
PHF1-211ENST00000495509 SNRNP48Q6IEG0 339 aaKnown RBP17.96■□□□□ 0.47
PHF1-211ENST00000495509 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 ZIC5Q96T25 663 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 CLIC4Q9Y696 253 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 ABCB11O95342 1321 aa17.96■□□□□ 0.47
PHF1-211ENST00000495509 NFIBO00712 420 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 CNMDO75829 334 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 CFBP00751 764 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 MCM4P33991 863 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 TRAF1Q13077 416 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 GRM1Q13255 1194 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 NFKBIBQ15653 356 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 ANKRD23Q86SG2 305 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 PAGR1Q9BTK6 254 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 TXNRD2Q9NNW7 524 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 RBPJLQ9UBG7 517 aa17.95■□□□□ 0.46
PHF1-211ENST00000495509 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
PHF1-211ENST00000495509 ATP2A1O14983 1001 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 FIBPO43427 364 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 STAT3P40763 770 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 KRT85P78386 507 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 CYP4F22Q6NT55 531 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
PHF1-211ENST00000495509 CCDC194A0A1B0GVG4 234 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 OAZ1P54368 228 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 INF2Q27J81 1249 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 Q3C1V9 767 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
PHF1-211ENST00000495509 CCDC102AQ96A19 550 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 R3HDMLQ9H3Y0 253 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
PHF1-211ENST00000495509 MANSC4A6NHS7 340 aaPredicted RBP17.93■□□□□ 0.46
PHF1-211ENST00000495509 IGF2BP3O00425 579 aaKnown RBP eCLIP17.93■□□□□ 0.46
PHF1-211ENST00000495509 KRT25Q7Z3Z0 450 aa17.93■□□□□ 0.46
PHF1-211ENST00000495509 MB21D1Q8N884 522 aa17.93■□□□□ 0.46
PHF1-211ENST00000495509 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
PHF1-211ENST00000495509 RNF146Q9NTX7 359 aa17.93■□□□□ 0.46
PHF1-211ENST00000495509 SLC45A1Q9Y2W3 748 aa17.93■□□□□ 0.46
PHF1-211ENST00000495509 A0A0G2JMZ2 1700 aa17.92■□□□□ 0.46
PHF1-211ENST00000495509 MYH7BA7E2Y1 1941 aa17.92■□□□□ 0.46
PHF1-211ENST00000495509 EDIL3O43854 480 aa17.92■□□□□ 0.46
PHF1-211ENST00000495509 PRPF40AO75400 957 aaKnown RBP17.92■□□□□ 0.46
PHF1-211ENST00000495509 APLP1P51693 650 aa17.92■□□□□ 0.46
PHF1-211ENST00000495509 NONOQ15233 471 aaKnown RBP eCLIP17.92■□□□□ 0.461e-7■■■■□ 26.2
PHF1-211ENST00000495509 SF3A1Q15459 793 aaKnown RBP17.92■□□□□ 0.46
PHF1-211ENST00000495509 RILPL1Q5EBL4 403 aa17.92■□□□□ 0.46
PHF1-211ENST00000495509 FCHSD1Q86WN1 690 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms