RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
HDLBP-245ENST00000494862 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-245ENST00000494862 LONP1P36776 959 aaKnown RBP13.06□□□□□ -0.32
HDLBP-245ENST00000494862 PRPHP41219 470 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 STAT2P52630 851 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 HIRAP54198 1017 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-245ENST00000494862 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 PYM1Q9BRP8 204 aaKnown RBP13.06□□□□□ -0.32
HDLBP-245ENST00000494862 PSTPIP2Q9H939 334 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 ADARB2Q9NS39 739 aaKnown RBP13.06□□□□□ -0.32
HDLBP-245ENST00000494862 TMEM260Q9NX78 707 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 GGA3Q9NZ52 723 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 USP25Q9UHP3 1055 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
HDLBP-245ENST00000494862 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 PITPNM2Q9BZ72 1349 aa13.06□□□□□ -0.32
HDLBP-245ENST00000494862 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 IL17AQ16552 155 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 DTHD1Q6ZMT9 781 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 PPP1R9BQ96SB3 815 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 FEZ1Q99689 392 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 KIAA1683Q9H0B3 1180 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 TMEM60Q9H2L4 133 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
HDLBP-245ENST00000494862 GOLGB1Q14789 3259 aaKnown RBP13.05□□□□□ -0.32
HDLBP-245ENST00000494862 WDR46O15213 610 aaKnown RBP13.04□□□□□ -0.32
HDLBP-245ENST00000494862 NEMFO60524 1076 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
HDLBP-245ENST00000494862 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 INPP5BP32019 993 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 UBE2SQ16763 222 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 SUPT20HL1Q3ZLR7 823 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 CCDC84Q86UT8 332 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-245ENST00000494862 SCYL3Q8IZE3 742 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 LPAR1Q92633 364 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
HDLBP-245ENST00000494862 WDR18Q9BV38 432 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 TUBE1Q9UJT0 475 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 SBF1O95248 1867 aa13.04□□□□□ -0.32
HDLBP-245ENST00000494862 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
HDLBP-245ENST00000494862 EDIL3O43854 480 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 TXLNAP40222 546 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 NUBP1P53384 320 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 NLRP12P59046 1061 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 SNAP25P60880 206 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-245ENST00000494862 ZRSR1Q15695 479 aaKnown RBP13.03□□□□□ -0.32
HDLBP-245ENST00000494862 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
HDLBP-245ENST00000494862 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 AK8Q96MA6 479 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
HDLBP-245ENST00000494862 A0A087X0B3 334 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 FOSP01100 380 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-245ENST00000494862 SLFN14P0C7P3 912 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.33
HDLBP-245ENST00000494862 ZNF165P49910 485 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 USP14P54578 494 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 POSTNQ15063 836 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 CEP57L1Q8IYX8 460 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-245ENST00000494862 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 DHX58Q96C10 678 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 ANO3Q9BYT9 981 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 CCSER1Q9C0I3 900 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 NAT10Q9H0A0 1025 aaKnown RBP13.02□□□□□ -0.33
HDLBP-245ENST00000494862 PICK1Q9NRD5 415 aa13.02□□□□□ -0.33
HDLBP-245ENST00000494862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
HDLBP-245ENST00000494862 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms