RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 WDR78Q5VTH9 848 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 C8orf76Q96K31 380 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 EHMT1Q9H9B1 1298 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 C6orf50Q9HD87 102 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 RNF186Q9NXI6 227 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 MAP3K20Q9NYL2 800 aaKnown RBP17.17■□□□□ 0.34
ACTB-213ENST00000493945 PFASO15067 1338 aa17.17■□□□□ 0.34
ACTB-213ENST00000493945 ESYT2A0FGR8 921 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 H3BQV1 296 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 TRPA1O75762 1119 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 ADCY7P51828 1080 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
ACTB-213ENST00000493945 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
ACTB-213ENST00000493945 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
ACTB-213ENST00000493945 IFFO2Q5TF58 517 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 REPS2Q8NFH8 660 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
ACTB-213ENST00000493945 SLC5A4Q9NY91 659 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 ADGRA2Q96PE1 1338 aa17.16■□□□□ 0.34
ACTB-213ENST00000493945 STRNO43815 780 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 JAK2O60674 1132 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 BCRP11274 1271 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 NLRP5P59047 1200 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 KCTD2Q14681 263 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 TRERF1Q96PN7 1200 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 BTBD7Q9P203 1132 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 CPA4Q9UI42 421 aa17.15■□□□□ 0.34
ACTB-213ENST00000493945 B4DLN1 442 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 FCGRTP55899 365 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 SNAP25P60880 206 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 ST3GAL1Q11201 340 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 C17orf99Q6UX52 265 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 GPKOWQ92917 476 aaPredicted RBP eCLIP17.14■□□□□ 0.33
ACTB-213ENST00000493945 COA7Q96BR5 231 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 ERO1AQ96HE7 468 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 MOV10L1Q9BXT6 1211 aaKnown RBP17.14■□□□□ 0.33
ACTB-213ENST00000493945 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 ZNF536O15090 1300 aa17.14■□□□□ 0.33
ACTB-213ENST00000493945 PLXNB2O15031 1838 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 GCOM1H8Y6P7 765 aaPredicted RBP17.13■□□□□ 0.33
ACTB-213ENST00000493945 STXBP3O00186 592 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 POLR2MP0CAP2 368 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 FCER1AP12319 257 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 ERCC3P19447 782 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 HOXD10P28358 340 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 SP3Q02447 781 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
ACTB-213ENST00000493945 ABRAQ8N0Z2 381 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 ANKRD35Q8N283 1001 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 SOCS4Q8WXH5 440 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
ACTB-213ENST00000493945 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 CNMDO75829 334 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 GNRH1P01148 92 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 AP3B2Q13367 1082 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 PKN1Q16512 942 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 NSMFQ6X4W1 530 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 RNF207Q6ZRF8 634 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
ACTB-213ENST00000493945 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
ACTB-213ENST00000493945 MMP19Q99542 508 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 ZMYND12Q9H0C1 365 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 TXNRD2Q9NNW7 524 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 ZNF236Q9UL36 1845 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 MGAMO43451 1857 aa17.12■□□□□ 0.33
ACTB-213ENST00000493945 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
ACTB-213ENST00000493945 FKTNO75072 461 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
ACTB-213ENST00000493945 KRT2P35908 639 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 PLEKHH3Q7Z736 793 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 IPO9Q96P70 1041 aaKnown RBP17.11■□□□□ 0.33
ACTB-213ENST00000493945 RIC8AQ9NPQ8 531 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
ACTB-213ENST00000493945 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
ACTB-213ENST00000493945 GPR25O00155 361 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
ACTB-213ENST00000493945 CFBP00751 764 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 FDPSP14324 419 aaKnown RBP17.1■□□□□ 0.33
ACTB-213ENST00000493945 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
ACTB-213ENST00000493945 GPR142Q7Z601 462 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 FBXO18Q8NFZ0 1043 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 WBP1LQ9NX94 342 aa17.1■□□□□ 0.33
ACTB-213ENST00000493945 PCDHA4Q9UN74 947 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms