RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 C16orf59Q7L2K0 433 aa20.59■□□□□ 0.89
COL9A1-210ENST00000493682 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
COL9A1-210ENST00000493682 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.89
COL9A1-210ENST00000493682 CSF2RAP15509 400 aa20.58■□□□□ 0.89
COL9A1-210ENST00000493682 GRIN2CQ14957 1233 aa20.58■□□□□ 0.89
COL9A1-210ENST00000493682 TMEM240Q5SV17 173 aa20.58■□□□□ 0.89
COL9A1-210ENST00000493682 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.89
COL9A1-210ENST00000493682 GNEQ9Y223 722 aaKnown RBP20.58■□□□□ 0.89
COL9A1-210ENST00000493682 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
COL9A1-210ENST00000493682 CDH23Q9H251 3354 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 TLR3O15455 904 aaKnown RBP20.57■□□□□ 0.88
COL9A1-210ENST00000493682 CD4P01730 458 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 MUM1L1Q5H9M0 696 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 CXCL17Q6UXB2 119 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 TLK2Q86UE8 772 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 TMEM199Q8N511 208 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 PPP1R12CQ9BZL4 782 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 CYP39A1Q9NYL5 469 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 ANAPC4Q9UJX5 808 aa20.57■□□□□ 0.88
COL9A1-210ENST00000493682 PRUNE2Q8WUY3 3088 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 RANBP6O60518 1105 aaKnown RBP20.56■□□□□ 0.88
COL9A1-210ENST00000493682 PTGS1P23219 599 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 NOVP48745 357 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 RASIP1Q5U651 963 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 SLC43A3Q8NBI5 491 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 TIFAQ96CG3 184 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 AP5M1Q9H0R1 490 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 ZNF576Q9H609 170 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 PDGFCQ9NRA1 345 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 CCPG1Q9ULG6 757 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 MTMR7Q9Y216 660 aa20.56■□□□□ 0.88
COL9A1-210ENST00000493682 ACRP10323 421 aa20.55■□□□□ 0.88
COL9A1-210ENST00000493682 SMPD1P17405 629 aa20.55■□□□□ 0.88
COL9A1-210ENST00000493682 CYP2C18P33260 490 aa20.55■□□□□ 0.88
COL9A1-210ENST00000493682 FSCN1Q16658 493 aaKnown RBP20.55■□□□□ 0.88
COL9A1-210ENST00000493682 IQSEC1Q6DN90 963 aa20.55■□□□□ 0.88
COL9A1-210ENST00000493682 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
COL9A1-210ENST00000493682 FBXO16Q8IX29 292 aaPredicted RBP20.55■□□□□ 0.88
COL9A1-210ENST00000493682 LRRC37A2A6NM11 1700 aa20.55■□□□□ 0.88
COL9A1-210ENST00000493682 GRXCR1A8MXD5 290 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 DYNC1LI2O43237 492 aaPredicted RBP20.54■□□□□ 0.88
COL9A1-210ENST00000493682 ORC4O43929 436 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 CABYRO75952 493 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 ICAM1P05362 532 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 FGRP09769 529 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 ALX1Q15699 326 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 ANKRD45Q5TZF3 282 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 TAPT1Q6NXT6 567 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 EEPD1Q7L9B9 569 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
COL9A1-210ENST00000493682 PURBQ96QR8 312 aaKnown RBP20.54■□□□□ 0.88
COL9A1-210ENST00000493682 GRIN2DO15399 1336 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 PBX2P40425 430 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 ITGA7Q13683 1181 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 TMEM63BQ5T3F8 832 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 PSRC1Q6PGN9 363 aaPredicted RBP20.53■□□□□ 0.88
COL9A1-210ENST00000493682 PBX4Q9BYU1 374 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 RANBP17Q9H2T7 1088 aaKnown RBP20.53■□□□□ 0.88
COL9A1-210ENST00000493682 HELLSQ9NRZ9 838 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
COL9A1-210ENST00000493682 Q9Y3F1 56 aa20.53■□□□□ 0.88
COL9A1-210ENST00000493682 ZEB2O60315 1214 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 SLC16A2P36021 539 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 BTNL9Q6UXG8 535 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 MORC4Q8TE76 937 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 HIPK3Q9H422 1215 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 VTA1Q9NP79 307 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 IL23AQ9NPF7 189 aa20.52■□□□□ 0.88
COL9A1-210ENST00000493682 BAATQ14032 418 aaPredicted RBP20.51■□□□□ 0.87
COL9A1-210ENST00000493682 USP38Q8NB14 1042 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 HERVK_113Q902F9 699 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 FAM227BQ96M60 508 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 TMEM47Q9BQJ4 181 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 TRPV6Q9H1D0 765 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 UMODL1Q5DID0 1318 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 VCANP13611 3396 aa20.51■□□□□ 0.87
COL9A1-210ENST00000493682 FGAP02671 866 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 TOP1P11387 765 aaKnown RBP20.5■□□□□ 0.87
COL9A1-210ENST00000493682 PDE1AP54750 535 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 PSMC6P62333 389 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 RRP12Q5JTH9 1297 aaKnown RBP20.5■□□□□ 0.87
COL9A1-210ENST00000493682 SYDE2Q5VT97 1194 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 KIAA1211Q6ZU35 1233 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 SEZ6LQ9BYH1 1024 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 CXXC1Q9P0U4 656 aaPredicted RBP20.5■□□□□ 0.87
COL9A1-210ENST00000493682 LCTP09848 1927 aa20.5■□□□□ 0.87
COL9A1-210ENST00000493682 FRMPD2Q68DX3 1309 aaPredicted RBP20.5■□□□□ 0.87
COL9A1-210ENST00000493682 A0A0D9SFI3 127 aa20.49■□□□□ 0.87
COL9A1-210ENST00000493682 NFIBO00712 420 aa20.49■□□□□ 0.87
COL9A1-210ENST00000493682 B4GALT4O60513 344 aa20.49■□□□□ 0.87
COL9A1-210ENST00000493682 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
COL9A1-210ENST00000493682 MCMDC2Q4G0Z9 681 aa20.49■□□□□ 0.87
COL9A1-210ENST00000493682 NOC4LQ9BVI4 516 aaKnown RBP20.49■□□□□ 0.87
COL9A1-210ENST00000493682 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms