RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 ZNF536O15090 1300 aa21.57■■□□□ 1.04
NECTIN3-211ENST00000493615 MARCKSP29966 332 aaPredicted RBP21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 GJA5P36382 358 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 CLK2P49760 499 aaKnown RBP21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 CUL5Q93034 780 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 SLC10A4Q96EP9 437 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 PCDHA7Q9UN72 937 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 SMCHD1A6NHR9 2005 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L15C9J2P7 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L13C9JLJ4 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L11C9JVI0 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L18D6R9N7 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L22D6RA61 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L17D6RBQ6 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L19D6RCP7 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L20D6RJB6 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 ME1P48163 572 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 MRPL12P52815 198 aaKnown RBP21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L24Q0WX57 530 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 INF2Q27J81 1249 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 TREML2Q5T2D2 321 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 USP17L6PQ6QN14 398 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 CATSPERGQ6ZRH7 1159 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 ATG4CQ96DT6 458 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 AGBL1Q96MI9 1066 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 ANP32EQ9BTT0 268 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 SLC38A10Q9HBR0 1119 aa21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 NOL7Q9UMY1 257 aaKnown RBP21.56■■□□□ 1.04
NECTIN3-211ENST00000493615 PPIL2Q13356 520 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 ZNF174Q15697 407 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 TTC38Q5R3I4 469 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 KRT25Q7Z3Z0 450 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 KCNG4Q8TDN1 519 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 KCNH4Q9UQ05 1017 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 MRVI1Q9Y6F6 885 aa21.55■■□□□ 1.04
NECTIN3-211ENST00000493615 A0A0G2JLL6 359 aaPredicted RBP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 CXCL11O14625 94 aa21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 MEIS2O14770 477 aa21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 PAXIP1Q6ZW49 1069 aaPredicted RBP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 PRRT2Q7Z6L0 340 aaPredicted RBP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 VWA5AO00534 786 aa21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 ICAM1P05362 532 aa21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 TRAPPC10P48553 1259 aa21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 ZNF157P51786 506 aaPredicted RBP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 GRM1Q13255 1194 aa21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 NONOQ15233 471 aaKnown RBP eCLIP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 RAVER2Q9HCJ3 691 aaKnown RBP21.54■■□□□ 1.04
NECTIN3-211ENST00000493615 MBD3O95983 291 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 HSPA6P17066 643 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 DSG3P32926 999 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 MKRN3Q13064 507 aaKnown RBP21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 COG2Q14746 738 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 AXDND1Q5T1B0 1012 aaPredicted RBP21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 GADL1Q6ZQY3 521 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 CPXCR1Q8N123 301 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 TBCKQ8TEA7 893 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 TBC1D5Q92609 795 aa21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 GZF1Q9H116 711 aaPredicted RBP21.53■■□□□ 1.04
NECTIN3-211ENST00000493615 GOLGA6L4A6NEF3 574 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 EDIL3O43854 480 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 MOGSQ13724 837 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 RGMBQ6NW40 437 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 CCPG1Q9ULG6 757 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 ADAMTS5Q9UNA0 930 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 PTPRFP10586 1907 aa21.52■■□□□ 1.04
NECTIN3-211ENST00000493615 PPP6R2O75170 966 aa21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 LIG1P18858 919 aa21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 MCM7P33993 719 aa21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 DEFB115Q30KQ5 88 aa21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 CAVIN1Q6NZI2 390 aaKnown RBP21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 REPS2Q8NFH8 660 aa21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 RLFQ13129 1914 aa21.52■■□□□ 1.03
NECTIN3-211ENST00000493615 UNCXA6NJT0 531 aa21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 ZBED4O75132 1171 aa21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 HOXA13P31271 388 aaPredicted RBP21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 TRAF1Q13077 416 aa21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 CYP4F22Q6NT55 531 aa21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 CLIC6Q96NY7 704 aa21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 GLT8D2Q9H1C3 349 aa21.51■■□□□ 1.03
NECTIN3-211ENST00000493615 SPDYE16A6NNV3 312 aaPredicted RBP21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 GRIN1Q05586 938 aa21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 ADALQ6DHV7 355 aa21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 POTEEQ6S8J3 1075 aa21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 PROCA1Q8NCQ7 364 aaPredicted RBP21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 TMEM63CQ9P1W3 806 aa21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 ABCB11O95342 1321 aa21.5■■□□□ 1.03
NECTIN3-211ENST00000493615 PTGDRQ13258 359 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 GOLPH3LQ9H4A5 285 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 FBXO2Q9UK22 296 aaPredicted RBP21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 CEP131Q9UPN4 1083 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 PARP14Q460N5 1801 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 RASSF10A6NK89 507 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 HOXA7P31268 230 aaPredicted RBP21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 LETM2Q2VYF4 491 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 NEK8Q86SG6 692 aa21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 CCAR1Q8IX12 1150 aaKnown RBP21.49■■□□□ 1.03
NECTIN3-211ENST00000493615 C4orf32Q8N8J7 132 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms