RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NCOR1O75376 2440 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 ZFYP08048 801 aaPredicted RBP21.04■□□□□ 0.96
NUP50-218ENST00000493456 OTOP2Q7RTS6 562 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 FAM160B2Q86V87 743 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 RPUSD2Q8IZ73 545 aaKnown RBP21.04■□□□□ 0.96
NUP50-218ENST00000493456 CHURC1Q8WUH1 139 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 AP5M1Q9H0R1 490 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 EPB41L4AQ9HCS5 686 aaPredicted RBP21.04■□□□□ 0.96
NUP50-218ENST00000493456 RNF146Q9NTX7 359 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 UMODL1Q5DID0 1318 aa21.04■□□□□ 0.96
NUP50-218ENST00000493456 GBF1Q92538 1859 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 TMEM232C9JQI7 657 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 GPAA1O43292 621 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 PRDM1O75626 825 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 TSPY3P0CV98 308 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 TSPY8P0CW00 308 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 PPP2R2DQ66LE6 453 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 GMCL1Q96IK5 515 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 NOC4LQ9BVI4 516 aaKnown RBP21.03■□□□□ 0.96
NUP50-218ENST00000493456 Q9Y3F1 56 aa21.03■□□□□ 0.96
NUP50-218ENST00000493456 MYO9BQ13459 2157 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 SOWAHBA6NEL2 793 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 RNF113AO15541 343 aaKnown RBP21.02■□□□□ 0.96
NUP50-218ENST00000493456 B4GALT4O60513 344 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 CCL23P55773 120 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 PDE4BQ07343 736 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 PPP4R3BQ5MIZ7 849 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 NEDD1Q8NHV4 660 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 GPATCH3Q96I76 525 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 WNT8AQ9H1J5 351 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
NUP50-218ENST00000493456 PCDHA11Q9Y5I1 949 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 SLC4A7Q9Y6M7 1214 aa21.02■□□□□ 0.96
NUP50-218ENST00000493456 ZNF536O15090 1300 aa21.02■□□□□ 0.95
NUP50-218ENST00000493456 GRIN2DO15399 1336 aa21.02■□□□□ 0.95
NUP50-218ENST00000493456 DYNC1LI2O43237 492 aaPredicted RBP21.01■□□□□ 0.95
NUP50-218ENST00000493456 PLA2G6O60733 806 aa21.01■□□□□ 0.95
NUP50-218ENST00000493456 APPP05067 770 aa21.01■□□□□ 0.95
NUP50-218ENST00000493456 SMPD1P17405 629 aa21.01■□□□□ 0.95
NUP50-218ENST00000493456 IKQ13123 557 aaPredicted RBP21.01■□□□□ 0.95
NUP50-218ENST00000493456 IQSEC1Q6DN90 963 aa21.01■□□□□ 0.95
NUP50-218ENST00000493456 STAG1Q8WVM7 1258 aa21.01■□□□□ 0.95
NUP50-218ENST00000493456 AGBL1Q96MI9 1066 aa21.01■□□□□ 0.95
NUP50-218ENST00000493456 PATL2C9JE40 543 aaKnown RBP21■□□□□ 0.95
NUP50-218ENST00000493456 PFKMP08237 780 aa21■□□□□ 0.95
NUP50-218ENST00000493456 SLC1A4P43007 532 aa21■□□□□ 0.95
NUP50-218ENST00000493456 AAK1Q2M2I8 961 aa21■□□□□ 0.95
NUP50-218ENST00000493456 LRRFIP1Q32MZ4 808 aaKnown RBP21■□□□□ 0.95
NUP50-218ENST00000493456 TRERF1Q96PN7 1200 aa21■□□□□ 0.95
NUP50-218ENST00000493456 NACAP1Q9BZK3 213 aa21■□□□□ 0.95
NUP50-218ENST00000493456 TRPV6Q9H1D0 765 aa21■□□□□ 0.95
NUP50-218ENST00000493456 SMARCA5O60264 1052 aaPredicted RBP20.99■□□□□ 0.95
NUP50-218ENST00000493456 SLC3A2P08195 630 aaKnown RBP20.99■□□□□ 0.95
NUP50-218ENST00000493456 ALAS1P13196 640 aa20.99■□□□□ 0.95
NUP50-218ENST00000493456 RABGGTBP53611 331 aa20.99■□□□□ 0.95
NUP50-218ENST00000493456 TAPT1Q6NXT6 567 aa20.99■□□□□ 0.95
NUP50-218ENST00000493456 VTA1Q9NP79 307 aa20.99■□□□□ 0.95
NUP50-218ENST00000493456 ZBBXA8MT70 800 aa20.98■□□□□ 0.95
NUP50-218ENST00000493456 M0R2C6 588 aa20.98■□□□□ 0.95
NUP50-218ENST00000493456 SUPT20HL2P0C7V6 817 aa20.98■□□□□ 0.95
NUP50-218ENST00000493456 ATP2A2P16615 1042 aaKnown RBP20.98■□□□□ 0.95
NUP50-218ENST00000493456 FBXO16Q8IX29 292 aaPredicted RBP20.98■□□□□ 0.95
NUP50-218ENST00000493456 IFNL3Q8IZI9 196 aa20.98■□□□□ 0.95
NUP50-218ENST00000493456 ALDH8A1Q9H2A2 487 aaPredicted RBP20.98■□□□□ 0.95
NUP50-218ENST00000493456 CYP39A1Q9NYL5 469 aa20.98■□□□□ 0.95
NUP50-218ENST00000493456 PLA2G5P39877 138 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 PSMC6P62333 389 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 TFAP4Q01664 338 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 MICALL1Q8N3F8 863 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 MORC4Q8TE76 937 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 PDGFCQ9NRA1 345 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 RAPGEFL1Q9UHV5 662 aa20.97■□□□□ 0.95
NUP50-218ENST00000493456 BMP1P13497 986 aa20.96■□□□□ 0.95
NUP50-218ENST00000493456 MCCP23508 829 aa20.96■□□□□ 0.95
NUP50-218ENST00000493456 EEPD1Q7L9B9 569 aa20.96■□□□□ 0.95
NUP50-218ENST00000493456 SCLYQ96I15 445 aa20.96■□□□□ 0.95
NUP50-218ENST00000493456 C1QTNF1Q9BXJ1 281 aa20.96■□□□□ 0.95
NUP50-218ENST00000493456 POLR3EQ9NVU0 708 aa20.96■□□□□ 0.95
NUP50-218ENST00000493456 LOC102724159A0A0B4J2E5 919 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 GTPBP6O43824 516 aaPredicted RBP20.95■□□□□ 0.94
NUP50-218ENST00000493456 MYOGP15173 224 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 POU3F3P20264 500 aaPredicted RBP20.95■□□□□ 0.94
NUP50-218ENST00000493456 PTGS1P23219 599 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 PPARAQ07869 468 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 PWP2Q15269 919 aaKnown RBP20.95■□□□□ 0.94
NUP50-218ENST00000493456 DUSP28Q4G0W2 176 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 MUM1L1Q5H9M0 696 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 TMEM67Q5HYA8 995 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 RCSD1Q6JBY9 416 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 VWCEQ96DN2 955 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 NAPBQ9H115 298 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 STX8Q9UNK0 236 aa20.95■□□□□ 0.94
NUP50-218ENST00000493456 ERC2O15083 957 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 ACTN1P12814 892 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 CPT1AP50416 773 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 NSMFQ6X4W1 530 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 KCTD1Q719H9 257 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 FAM122AQ96E09 287 aa20.94■□□□□ 0.94
NUP50-218ENST00000493456 ADD3Q9UEY8 706 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms