RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 BTNL9Q6UXG8 535 aa15.93■□□□□ 0.14
PTPN7-216ENST00000492977 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-216ENST00000492977 DPF2Q92785 391 aa15.93■□□□□ 0.14
PTPN7-216ENST00000492977 TMEM39BQ9GZU3 492 aa15.93■□□□□ 0.14
PTPN7-216ENST00000492977 RRAGDQ9NQL2 400 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-216ENST00000492977 FZD9O00144 591 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 CCNT1O60563 726 aaKnown RBP15.92■□□□□ 0.14
PTPN7-216ENST00000492977 BMP3P12645 472 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 CLK2P49760 499 aaKnown RBP15.92■□□□□ 0.14
PTPN7-216ENST00000492977 TPM4P67936 248 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 TNFAIP1Q13829 316 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 QRICH1Q2TAL8 776 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 LETM2Q2VYF4 491 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
PTPN7-216ENST00000492977 PAGE5Q96GU1 130 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 AK8Q96MA6 479 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 TMEM60Q9H2L4 133 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 PSTPIP2Q9H939 334 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 ZBTB21Q9ULJ3 1066 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 ZKSCAN5Q9Y2L8 839 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 TMX2Q9Y320 296 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 A0A1W2PRG0 241 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 NEMFO60524 1076 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 OR52Z1P0C646 297 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
PTPN7-216ENST00000492977 CDC25BP30305 580 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 E2F4Q16254 413 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-216ENST00000492977 MLKLQ8NB16 471 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 CCSER1Q9C0I3 900 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 GOPCQ9HD26 462 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 TMEM260Q9NX78 707 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 DACH1Q9UI36 760 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 MAN1B1Q9UKM7 699 aa15.92■□□□□ 0.14
PTPN7-216ENST00000492977 MORC3Q14149 939 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 CT47A1Q5JQC4 288 aaPredicted RBP15.91■□□□□ 0.14
PTPN7-216ENST00000492977 SYDE2Q5VT97 1194 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 MCTP2Q6DN12 878 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 ISM2Q6H9L7 571 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 MRFAP1L1Q96HT8 127 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 GSDMAQ96QA5 445 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 PCDHA1Q9Y5I3 950 aa15.91■□□□□ 0.14
PTPN7-216ENST00000492977 TMEM232C9JQI7 657 aa15.9■□□□□ 0.14
PTPN7-216ENST00000492977 GTPBP6O43824 516 aaPredicted RBP15.9■□□□□ 0.14
PTPN7-216ENST00000492977 CLCN1P35523 988 aa15.9■□□□□ 0.14
PTPN7-216ENST00000492977 CAP2P40123 477 aa15.9■□□□□ 0.14
PTPN7-216ENST00000492977 GRAMD1CQ8IYS0 662 aa15.9■□□□□ 0.14
PTPN7-216ENST00000492977 NAP1L4Q99733 375 aaKnown RBP15.9■□□□□ 0.14
PTPN7-216ENST00000492977 AMNQ9BXJ7 453 aa15.9■□□□□ 0.14
PTPN7-216ENST00000492977 SH2D4AQ9H788 454 aa15.9■□□□□ 0.14
PTPN7-216ENST00000492977 SHTN1A0MZ66 631 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-216ENST00000492977 BMP6P22004 513 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 UBA7P41226 1012 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 AFMP43652 599 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 GMPSP49915 693 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-216ENST00000492977 RASSF7Q02833 373 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 DPYDQ12882 1025 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 TRAF1Q13077 416 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 IKQ13123 557 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-216ENST00000492977 RASA3Q14644 834 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 NCAPHQ15003 741 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 PPP4R3AQ6IN85 833 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 MIGA2Q7L4E1 593 aa15.89■□□□□ 0.13
PTPN7-216ENST00000492977 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-216ENST00000492977 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.89■□□□□ 0.13
PTPN7-216ENST00000492977 ASNSP08243 561 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 ECE1P42892 770 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 MYL5Q02045 173 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 MICALL2Q8IY33 904 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 ACER1Q8TDN7 264 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 MTMR9Q96QG7 549 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 DISC1Q9NRI5 854 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 GINM1Q9NU53 330 aa15.88■□□□□ 0.13
PTPN7-216ENST00000492977 CNOT7Q9UIV1 285 aaKnown RBP15.88■□□□□ 0.13
PTPN7-216ENST00000492977 PLA2G6O60733 806 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 GCFC2P16383 781 aaKnown RBP15.87■□□□□ 0.13
PTPN7-216ENST00000492977 STAT6P42226 847 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 STAT2P52630 851 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 CALCRLQ16602 461 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 UBE2SQ16763 222 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 CDAN1Q8IWY9 1227 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 DRC7Q8IY82 874 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 VCPKMTQ9H867 229 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPN7-216ENST00000492977 EDIL3O43854 480 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 MYL1P05976 194 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 PRELPP51888 382 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 AP3B2Q13367 1082 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 SPC24Q8NBT2 197 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 NLGN2Q8NFZ4 835 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 CHURC1Q8WUH1 139 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 TEPSINQ96N21 525 aa15.87■□□□□ 0.13
PTPN7-216ENST00000492977 MAGEF1Q9HAY2 307 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms