RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 JMYQ8N9B5 988 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 PRPF38AQ8NAV1 312 aaKnown RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 DAGLBQ8NCG7 672 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 LEO1Q8WVC0 666 aaPredicted RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 PGBD1Q96JS3 809 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 C12orf42Q96LP6 360 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 GLT8D2Q9H1C3 349 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 BIN2Q9UBW5 565 aaPredicted RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 AFG3L2Q9Y4W6 797 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 CLIC4Q9Y696 253 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 ABCB11O95342 1321 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 MGAMO43451 1857 aa9.19□□□□□ -0.94
FDPS-218ENST00000492887 MYH9P35579 1960 aaKnown RBP9.19□□□□□ -0.94
FDPS-218ENST00000492887 ESYT2A0FGR8 921 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 SPDYE3A6NKU9 549 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 TRAK2O60296 914 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 PLA2G6O60733 806 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 PPP1R11O60927 126 aaPredicted RBP9.18□□□□□ -0.94
FDPS-218ENST00000492887 YEATS4O95619 227 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 ALAS1P13196 640 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 OSBPP22059 807 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 UBE2HP62256 183 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 FKBP1BP68106 108 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 PABPC4Q13310 644 aaKnown RBP eCLIP9.18□□□□□ -0.94
FDPS-218ENST00000492887 ZNF174Q15697 407 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 INF2Q27J81 1249 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
FDPS-218ENST00000492887 KCNG4Q8TDN1 519 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 SYAP1Q96A49 352 aaPredicted RBP9.18□□□□□ -0.94
FDPS-218ENST00000492887 SHISA4Q96DD7 197 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 ATG4CQ96DT6 458 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 MTMR8Q96EF0 704 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 ZMYND12Q9H0C1 365 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 PSTPIP2Q9H939 334 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 EHMT1Q9H9B1 1298 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 RAVER2Q9HCJ3 691 aaKnown RBP9.18□□□□□ -0.94
FDPS-218ENST00000492887 RIC8AQ9NPQ8 531 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 HOMER2Q9NSB8 354 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 LMBRD1Q9NUN5 540 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 TMEM260Q9NX78 707 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 PCDHA6Q9UN73 950 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 MRPL11Q9Y3B7 192 aaKnown RBP9.18□□□□□ -0.94
FDPS-218ENST00000492887 PCDHA8Q9Y5H6 950 aa9.18□□□□□ -0.94
FDPS-218ENST00000492887 ELP1O95163 1332 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 IRF6O14896 467 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 SPTLC2O15270 562 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 MARCH6O60337 910 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
FDPS-218ENST00000492887 BMP15O95972 392 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 CFBP00751 764 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 FDX1P10109 184 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 MARCKSP29966 332 aaPredicted RBP9.17□□□□□ -0.94
FDPS-218ENST00000492887 MCM7P33993 719 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 LETM2Q2VYF4 491 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 CCDC73Q6ZRK6 1079 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
FDPS-218ENST00000492887 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 TMEM87AQ8NBN3 555 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 POLR3EQ9NVU0 708 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 RTEL1Q9NZ71 1219 aa9.17□□□□□ -0.94
FDPS-218ENST00000492887 A0A0G2JLL6 359 aaPredicted RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 CXCL11O14625 94 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 CCNT1O60563 726 aaKnown RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 ICAM1P05362 532 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 TRAPPC10P48553 1259 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 HUNKP57058 714 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 AP3B2Q13367 1082 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 SNAPC2Q13487 334 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 COG2Q14746 738 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 SH3D19Q5HYK7 790 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 TREML2Q5T2D2 321 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 SNRNP48Q6IEG0 339 aaKnown RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 CATSPERGQ6ZRH7 1159 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 FASTKD5Q7L8L6 764 aaKnown RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 PRRT2Q7Z6L0 340 aaPredicted RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 NEK8Q86SG6 692 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 PROCA1Q8NCQ7 364 aaPredicted RBP9.16□□□□□ -0.94
FDPS-218ENST00000492887 TBCKQ8TEA7 893 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 AGBL1Q96MI9 1066 aa9.16□□□□□ -0.94
FDPS-218ENST00000492887 ANO3Q9BYT9 981 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms