RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 CDHR1Q96JP9 859 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 PGBD1Q96JS3 809 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 CSRNP1Q96S65 589 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 ELAC2Q9BQ52 826 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 NUP62CLQ9H1M0 184 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 CXorf56Q9H5V9 222 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 KBTBD4Q9NVX7 518 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 OBP2AQ9NY56 170 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 ZNF180Q9UJW8 692 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 RCOR1Q9UKL0 485 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 DOLKQ9UPQ8 538 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 IPPQ9Y573 584 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 PTCH2Q9Y6C5 1203 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 MORC2Q9Y6X9 1032 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 LRP6O75581 1613 aa4.31□□□□□ -1.72
ATPAF1-206ENST00000492233 BCL9O00512 1426 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 RIC1Q4ADV7 1423 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 XIRP1Q702N8 1843 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ABCA3Q99758 1704 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 SHANK3Q9BYB0 1731 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ZNF335Q9H4Z2 1342 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 E2F8A0AVK6 867 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PTPDC1A2A3K4 754 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 VSTM5A8MXK1 200 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ERVV-1B6SEH8 477 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 H3BQV1 296 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 IRS4O14654 1257 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 SNX2O60749 519 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 DTNBO60941 627 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 TRIM37O94972 964 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ADCY5O95622 1261 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CAVIN2O95810 425 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CYP19A1P11511 503 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 GTF2E1P29083 439 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PDIA3P30101 505 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CLK1P49759 484 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CTSWP56202 376 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 TYRO3Q06418 890 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ITKQ08881 620 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 KIAA2012Q0VF49 1180 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 IFIT5Q13325 482 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PIN1Q13526 163 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 UBE3CQ15386 1083 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 MTERF2Q49AM1 385 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 TTC39AQ5SRH9 613 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 IFFO2Q5TF58 517 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 NXNQ6DKJ4 435 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 FAM173BQ6P4H8 233 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 C1orf228Q6PIY5 440 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ZBTB46Q86UZ6 589 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 LCA5Q86VQ0 697 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 NIM1KQ8IY84 436 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 MB21D2Q8IYB1 491 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PJA1Q8NG27 643 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 TTLL11Q8NHH1 800 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PIBF1Q8WXW3 757 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 RPGRQ92834 1020 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 TIFAQ96CG3 184 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PGBD4Q96DM1 585 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PAWRQ96IZ0 340 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 STRBPQ96SI9 672 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 RTFDC1Q9BY42 306 aaPredicted RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 LRRC2Q9BYS8 371 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 SAP130Q9H0E3 1048 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CSRNP2Q9H175 543 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 TMEM134Q9H6X4 195 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CNNM2Q9H8M5 875 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 RIC8AQ9NPQ8 531 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 SCUBE2Q9NQ36 999 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 KMT5AQ9NQR1 393 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 STRN4Q9NRL3 753 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 DACT1Q9NYF0 836 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 PFDN2Q9UHV9 154 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 CFAP45Q9UL16 551 aa4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 AFDNP55196 1824 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-206ENST00000492233 ATRNO75882 1429 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 TOGARAM1Q9Y4F4 1720 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 NHSL1Q5SYE7 1610 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 A0A0G2JLW4 131 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ANKRD18BA2A2Z9 1011 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 GOLGA6L4A6NEF3 574 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 SMAPO00193 183 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 CTAGE5O15320 804 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 AP5Z1O43299 807 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 PDE8AO60658 829 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 PPFIA3O75145 1194 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 RHOBTB3O94955 611 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 UQCRFS1P1P0C7P4 283 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 FDPSP14324 419 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 LMNB1P20700 586 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 FGFR2P21802 821 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 IGFBP4P22692 258 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ITGA6P23229 1130 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ADD2P35612 726 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 IL6STP40189 918 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 ZAP70P43403 619 aa4.29□□□□□ -1.72
ATPAF1-206ENST00000492233 PSMC1P62191 440 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms