RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 VAT1LQ9HCJ6 419 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 ORC3Q9UBD5 711 aaPredicted RBP25.95■■□□□ 1.74
USF3-203ENST00000491165 PCDHA7Q9UN72 937 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 V9GY48 417 aaPredicted RBP25.95■■□□□ 1.74
USF3-203ENST00000491165 SMCHD1A6NHR9 2005 aa25.95■■□□□ 1.74
USF3-203ENST00000491165 A0A0G2JLL6 359 aaPredicted RBP25.94■■□□□ 1.74
USF3-203ENST00000491165 MOGSQ13724 837 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 PRRT2Q7Z6L0 340 aaPredicted RBP25.94■■□□□ 1.74
USF3-203ENST00000491165 ADGRF4Q8IZF3 695 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 RIOX1Q9H6W3 641 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 WDR46O15213 610 aaKnown RBP25.94■■□□□ 1.74
USF3-203ENST00000491165 FSTL1Q12841 308 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 ADALQ6DHV7 355 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 DHX40Q8IX18 779 aaKnown RBP25.94■■□□□ 1.74
USF3-203ENST00000491165 CEP57L1Q8IYX8 460 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 SHISA4Q96DD7 197 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 C16orf45Q96MC5 204 aaPredicted RBP25.94■■□□□ 1.74
USF3-203ENST00000491165 SPZ1Q9BXG8 430 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 RPAP3Q9H6T3 665 aaPredicted RBP25.94■■□□□ 1.74
USF3-203ENST00000491165 JMJD4Q9H9V9 463 aa25.94■■□□□ 1.74
USF3-203ENST00000491165 A0A1W2PQ27 194 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 A0A1W2PQ64 194 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 A0A1W2PQD8 194 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 CTIFO43310 598 aaKnown RBP25.93■■□□□ 1.74
USF3-203ENST00000491165 NEMFO60524 1076 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 GNAQP50148 359 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 CPLX2Q6PUV4 134 aaKnown RBP25.93■■□□□ 1.74
USF3-203ENST00000491165 FMR1NBQ8N0W7 255 aaPredicted RBP25.93■■□□□ 1.74
USF3-203ENST00000491165 C8orf76Q96K31 380 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 RNF26Q9BY78 433 aaPredicted RBP25.93■■□□□ 1.74
USF3-203ENST00000491165 TLL2Q9Y6L7 1015 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 CDKL5O76039 1030 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 SNAP25P60880 206 aa25.93■■□□□ 1.74
USF3-203ENST00000491165 SSRP1Q08945 709 aaKnown RBP25.93■■□□□ 1.74
USF3-203ENST00000491165 NAT10Q9H0A0 1025 aaKnown RBP25.93■■□□□ 1.74
USF3-203ENST00000491165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.92■■□□□ 1.74
USF3-203ENST00000491165 STAT2P52630 851 aa25.92■■□□□ 1.74
USF3-203ENST00000491165 HOMER1Q86YM7 354 aa25.92■■□□□ 1.74
USF3-203ENST00000491165 MS4A4AQ96JQ5 239 aa25.92■■□□□ 1.74
USF3-203ENST00000491165 PIGSQ96S52 555 aa25.92■■□□□ 1.74
USF3-203ENST00000491165 TMEM88BA6NKF7 163 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 CXCL11O14625 94 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 PRPF3O43395 683 aaKnown RBP25.91■■□□□ 1.74
USF3-203ENST00000491165 STK38Q15208 465 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 SAMD1Q6SPF0 538 aaPredicted RBP25.91■■□□□ 1.74
USF3-203ENST00000491165 BTNL9Q6UXG8 535 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 LRRC8AQ8IWT6 810 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 KCNG4Q8TDN1 519 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 STK36Q9NRP7 1315 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 TNNT1P13805 278 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 IKQ13123 557 aaPredicted RBP25.91■■□□□ 1.74
USF3-203ENST00000491165 SPRYD7Q5W111 196 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 LINC00301Q8NCQ3 95 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 LZTS2Q9BRK4 669 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 TANGO6Q9C0B7 1094 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 PRR12Q9ULL5 1215 aa25.91■■□□□ 1.74
USF3-203ENST00000491165 SMTNL1A8MU46 457 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 ZNF157P51786 506 aaPredicted RBP25.9■■□□□ 1.74
USF3-203ENST00000491165 SF3A1Q15459 793 aaKnown RBP25.9■■□□□ 1.74
USF3-203ENST00000491165 RASAL3Q86YV0 1011 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 FBXO18Q8NFZ0 1043 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 SDF4Q9BRK5 362 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 POLR3EQ9NVU0 708 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 TMOD4Q9NZQ9 345 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 COL11A1P12107 1806 aaPredicted RBP25.9■■□□□ 1.74
USF3-203ENST00000491165 YEATS4O95619 227 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 TPD52L1Q16890 204 aaPredicted RBP25.9■■□□□ 1.74
USF3-203ENST00000491165 OTUD7BQ6GQQ9 843 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 GADL1Q6ZQY3 521 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 BRAPQ7Z569 592 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 KIFC2Q96AC6 838 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 MTMR8Q96EF0 704 aa25.9■■□□□ 1.74
USF3-203ENST00000491165 ABT1Q9ULW3 272 aaKnown RBP25.9■■□□□ 1.74
USF3-203ENST00000491165 PPP1R11O60927 126 aaPredicted RBP25.89■■□□□ 1.74
USF3-203ENST00000491165 SMARCA1P28370 1054 aa25.89■■□□□ 1.74
USF3-203ENST00000491165 SYDE2Q5VT97 1194 aa25.89■■□□□ 1.74
USF3-203ENST00000491165 TRIM22Q8IYM9 498 aa25.89■■□□□ 1.74
USF3-203ENST00000491165 A0A087WWV3 80 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 A0A1B0GVL5 298 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 DEXIO95424 95 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 TAL1P17542 331 aaPredicted RBP25.88■■□□□ 1.73
USF3-203ENST00000491165 RGMBQ6NW40 437 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 AOPEPQ8N6M6 819 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 ANKRD7Q92527 254 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 GPKOWQ92917 476 aaPredicted RBP eCLIP25.88■■□□□ 1.73
USF3-203ENST00000491165 PAXBP1Q9Y5B6 917 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 CLIC4Q9Y696 253 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 FLOT1O75955 427 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 NDUFA8P51970 172 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 TYW1BQ6NUM6 668 aa25.88■■□□□ 1.73
USF3-203ENST00000491165 SNAPC2Q13487 334 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 GPAT2Q6NUI2 795 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 PROCA1Q8NCQ7 364 aaPredicted RBP25.87■■□□□ 1.73
USF3-203ENST00000491165 ALG1Q9BT22 464 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 FEM1BQ9UK73 627 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 PLA2G6O60733 806 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 ZBTB48P10074 688 aaPredicted RBP25.87■■□□□ 1.73
USF3-203ENST00000491165 PFKFB3Q16875 520 aaPredicted RBP25.87■■□□□ 1.73
USF3-203ENST00000491165 MYSM1Q5VVJ2 828 aa25.87■■□□□ 1.73
USF3-203ENST00000491165 POTEEQ6S8J3 1075 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms