RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 AOC2O75106 756 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 SLC25A27O95847 323 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 CYP2C8P10632 490 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 ALAS1P13196 640 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 VEGFBP49765 207 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
VARS2-210ENST00000490699 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 MCF2L2Q86YR7 1114 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 GPRC5AQ8NFJ5 357 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 RAVER2Q9HCJ3 691 aaKnown RBP12.6□□□□□ -0.39
VARS2-210ENST00000490699 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 PARP14Q460N5 1801 aa12.6□□□□□ -0.39
VARS2-210ENST00000490699 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
VARS2-210ENST00000490699 IGF2BP3O00425 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
VARS2-210ENST00000490699 ATP2A1O14983 1001 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 CA12O43570 354 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 STAT3P40763 770 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 MRPL12P52815 198 aaKnown RBP12.59□□□□□ -0.39
VARS2-210ENST00000490699 SNAP25P60880 206 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 MAP2K1Q02750 393 aaPredicted RBP12.59□□□□□ -0.39
VARS2-210ENST00000490699 ST3GAL1Q11201 340 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 WDR78Q5VTH9 848 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 RGS22Q8NE09 1264 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
VARS2-210ENST00000490699 PTPN18Q99952 460 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 ADAMTS5Q9UNA0 930 aa12.59□□□□□ -0.39
VARS2-210ENST00000490699 A0A0G2JMZ2 1700 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 ADCY7P51828 1080 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 FOSBP53539 338 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 ERVK-24P63145 666 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 KIF22Q14807 665 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 FAM110CQ1W6H9 321 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 WWC2Q6AWC2 1192 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 CHST13Q8NET6 341 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 MAF1Q9H063 256 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 MROH8Q9H579 483 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 ACAD9Q9H845 621 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 RNF146Q9NTX7 359 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 IVNS1ABPQ9Y6Y0 642 aa12.58□□□□□ -0.4
VARS2-210ENST00000490699 ESYT2A0FGR8 921 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 SMCO2A6NFE2 343 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 STXBP3O00186 592 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 TLR2O60603 784 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 FDPSP14324 419 aaKnown RBP12.57□□□□□ -0.4
VARS2-210ENST00000490699 KRT2P35908 639 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 NUCB2P80303 420 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 HTRA3P83110 453 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 TMEM132BQ14DG7 1078 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 RIOX2Q8IUF8 465 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 SAMD3Q8N6K7 520 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 SHCBP1Q8NEM2 672 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 COA7Q96BR5 231 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
VARS2-210ENST00000490699 PSTPIP2Q9H939 334 aa12.57□□□□□ -0.4
VARS2-210ENST00000490699 MAP3K20Q9NYL2 800 aaKnown RBP12.57□□□□□ -0.4
VARS2-210ENST00000490699 ZNF214Q9UL59 606 aaPredicted RBP12.57□□□□□ -0.4
VARS2-210ENST00000490699 COL11A1P12107 1806 aaPredicted RBP12.57□□□□□ -0.4
VARS2-210ENST00000490699 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
VARS2-210ENST00000490699 THSD7BQ9C0I4 1608 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 GCOM1H8Y6P7 765 aaPredicted RBP12.56□□□□□ -0.4
VARS2-210ENST00000490699 STX6O43752 255 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 MAPK4P31152 587 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 CRHR2Q13324 411 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 KCTD2Q14681 263 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 ARHGEF6Q15052 776 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 PKN1Q16512 942 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 KRT40Q6A162 431 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 REXO1Q8N1G1 1221 aaKnown RBP12.56□□□□□ -0.4
VARS2-210ENST00000490699 FBXO18Q8NFZ0 1043 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 SAGE1Q9NXZ1 904 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 MORF4L1Q9UBU8 362 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
VARS2-210ENST00000490699 PCDHA4Q9UN74 947 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 RLFQ13129 1914 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 PFASO15067 1338 aa12.56□□□□□ -0.4
VARS2-210ENST00000490699 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
VARS2-210ENST00000490699 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 B4DLN1 442 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 CFBP00751 764 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 MMP1P03956 469 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 FCER1AP12319 257 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 SYT1P21579 422 aa12.55□□□□□ -0.4
VARS2-210ENST00000490699 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms