RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 CABYRO75952 493 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 CIAO1O76071 339 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 PDGFBP01127 241 aaPredicted RBP8.93□□□□□ -0.98
COL9A1-209ENST00000489861 HLA-DOAP06340 250 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 IQCF3P0C7M6 154 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 SHMT1P34896 483 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 FRMD5Q7Z6J6 570 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 SPICE1Q8N0Z3 855 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 BANK1Q8NDB2 785 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 NKD2Q969F2 451 aaPredicted RBP8.93□□□□□ -0.98
COL9A1-209ENST00000489861 POP1Q99575 1024 aaKnown RBP8.93□□□□□ -0.98
COL9A1-209ENST00000489861 ZBED2Q9BTP6 218 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 ABHD16BQ9H3Z7 469 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 CLDND1Q9NY35 253 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 ZNF214Q9UL59 606 aaPredicted RBP8.93□□□□□ -0.98
COL9A1-209ENST00000489861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
COL9A1-209ENST00000489861 FLNBO75369 2602 aaKnown RBP8.92□□□□□ -0.98
COL9A1-209ENST00000489861 TNKSO95271 1327 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 STXBP3O00186 592 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 KDM4AO75164 1064 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 BAIAP3O94812 1187 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 GJB5O95377 273 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 RFC2P35250 354 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 STAT3P40763 770 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 KCNJ6P48051 423 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 SIGLEC14Q08ET2 396 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 GPNMBQ14956 572 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 FSCN1Q16658 493 aaKnown RBP8.92□□□□□ -0.98
COL9A1-209ENST00000489861 TCTN1Q2MV58 587 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 ATF7IPQ6VMQ6 1270 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 RPAINQ86UA6 219 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 SPATA5Q8NB90 893 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 FBXO22Q8NEZ5 403 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 REPS2Q8NFH8 660 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.92□□□□□ -0.98
COL9A1-209ENST00000489861 XAGE2Q96GT9 111 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 RAD9AQ99638 391 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 NOL10Q9BSC4 688 aaKnown RBP8.92□□□□□ -0.98
COL9A1-209ENST00000489861 USP44Q9H0E7 712 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 FBXO28Q9NVF7 368 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 SERPINB13Q9UIV8 391 aa8.92□□□□□ -0.98
COL9A1-209ENST00000489861 PA2G4Q9UQ80 394 aaKnown RBP8.92□□□□□ -0.98
COL9A1-209ENST00000489861 GNEQ9Y223 722 aaKnown RBP8.92□□□□□ -0.98
COL9A1-209ENST00000489861 BAG3O95817 575 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 PLCG2P16885 1265 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 DYNLL1P63167 89 aaKnown RBP8.91□□□□□ -0.98
COL9A1-209ENST00000489861 EVX2Q03828 476 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 EXOSC9Q06265 439 aaKnown RBP8.91□□□□□ -0.98
COL9A1-209ENST00000489861 CTC1Q2NKJ3 1217 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 TIGD5Q53EQ6 642 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 TMEM63BQ5T3F8 832 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 ARMCX2Q7L311 632 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 ZNF467Q7Z7K2 595 aaPredicted RBP8.91□□□□□ -0.98
COL9A1-209ENST00000489861 TLK2Q86UE8 772 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 CLEC10AQ8IUN9 316 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 SIAH1Q8IUQ4 282 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 PPP1R13LQ8WUF5 828 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 SEZ6LQ9BYH1 1024 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 EHD4Q9H223 541 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 CABP5Q9NP86 173 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
COL9A1-209ENST00000489861 A0A1B0GUL7 405 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 LOC730098B7Z3J9 87 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 VWA5AO00534 786 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 SUPT20HL2P0C7V6 817 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 IL15P40933 162 aaPredicted RBP8.9□□□□□ -0.98
COL9A1-209ENST00000489861 MCAMP43121 646 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 TNFAIP2Q03169 654 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 SMAD4Q13485 552 aaKnown RBP8.9□□□□□ -0.98
COL9A1-209ENST00000489861 ST3GAL2Q16842 350 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 NAA16Q6N069 864 aaPredicted RBP8.9□□□□□ -0.98
COL9A1-209ENST00000489861 FAM117BQ6P1L5 589 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 MAGEB6Q8N7X4 407 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 DDX11Q96FC9 970 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 NSUN3Q9H649 340 aaKnown RBP8.9□□□□□ -0.98
COL9A1-209ENST00000489861 LRP2BPQ9P2M1 347 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 HDAC5Q9UQL6 1122 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 RIPK3Q9Y572 518 aa8.9□□□□□ -0.98
COL9A1-209ENST00000489861 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 PITPNM1O00562 1244 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 DYNC1LI2O43237 492 aaPredicted RBP8.89□□□□□ -0.99
COL9A1-209ENST00000489861 TBX10O75333 385 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 SMPD1P17405 629 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 PLCD1P51178 756 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 NUBP1P53384 320 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
COL9A1-209ENST00000489861 MVPQ14764 893 aaKnown RBP8.89□□□□□ -0.99
COL9A1-209ENST00000489861 PTPROQ16827 1216 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 EPC2Q52LR7 807 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
COL9A1-209ENST00000489861 CCDC144CPQ8IYA2 1237 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 CTNNA3Q9UI47 895 aa8.89□□□□□ -0.99
COL9A1-209ENST00000489861 DDX49Q9Y6V7 483 aaKnown RBP8.89□□□□□ -0.99
COL9A1-209ENST00000489861 LINC01565O15544 149 aa8.88□□□□□ -0.99
COL9A1-209ENST00000489861 HOXB3P14651 431 aaPredicted RBP8.88□□□□□ -0.99
COL9A1-209ENST00000489861 ARID4AP29374 1257 aaPredicted RBP8.88□□□□□ -0.99
COL9A1-209ENST00000489861 GTF2F1P35269 517 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL9A1-209ENST00000489861 HYAL1Q12794 435 aa8.88□□□□□ -0.99
COL9A1-209ENST00000489861 PUM1Q14671 1186 aaKnown RBP eCLIP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms