RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SKOR2Q2VWA4 1001 aaPredicted RBP23.88■■□□□ 1.41
SND1-214ENST00000489417 JAKMIP3Q5VZ66 844 aa23.88■■□□□ 1.41
SND1-214ENST00000489417 ATG4CQ96DT6 458 aa23.88■■□□□ 1.41
SND1-214ENST00000489417 TMEM260Q9NX78 707 aa23.88■■□□□ 1.41
SND1-214ENST00000489417 CTDP1Q9Y5B0 961 aaPredicted RBP23.88■■□□□ 1.41
SND1-214ENST00000489417 PARP14Q460N5 1801 aa23.88■■□□□ 1.41
SND1-214ENST00000489417 MYPNQ86TC9 1320 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 TRAK2O60296 914 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 UBE2HP62256 183 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 NONOQ15233 471 aaKnown RBP eCLIP23.87■■□□□ 1.41
SND1-214ENST00000489417 UBE2SQ16763 222 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 TREML2Q5T2D2 321 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 KCNG4Q8TDN1 519 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 MRPL11Q9Y3B7 192 aaKnown RBP23.87■■□□□ 1.41
SND1-214ENST00000489417 ZNF536O15090 1300 aa23.87■■□□□ 1.41
SND1-214ENST00000489417 VWA5AO00534 786 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 SPTLC2O15270 562 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 CLK2P49760 499 aaKnown RBP23.86■■□□□ 1.41
SND1-214ENST00000489417 SLC39A14Q15043 492 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 PTPAQ15257 358 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 TTC38Q5R3I4 469 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 CST9Q5W186 159 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 WNK4Q96J92 1243 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 PNMA2Q9UL42 364 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 CCPG1Q9ULG6 757 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 PCDHB6Q9Y5E3 794 aa23.86■■□□□ 1.41
SND1-214ENST00000489417 DDX49Q9Y6V7 483 aaKnown RBP23.86■■□□□ 1.41
SND1-214ENST00000489417 MBD3O95983 291 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 TEX2Q8IWB9 1127 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 AGBL1Q96MI9 1066 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 ADAMTS5Q9UNA0 930 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 CEP131Q9UPN4 1083 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 RLFQ13129 1914 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 TRPM7Q96QT4 1865 aa23.85■■□□□ 1.41
SND1-214ENST00000489417 SNAPC2Q13487 334 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 INF2Q27J81 1249 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 FASTKD5Q7L8L6 764 aaKnown RBP23.84■■□□□ 1.41
SND1-214ENST00000489417 RAVER2Q9HCJ3 691 aaKnown RBP23.84■■□□□ 1.41
SND1-214ENST00000489417 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.84■■□□□ 1.41
SND1-214ENST00000489417 HOXC10Q9NYD6 342 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 GOLGA6L4A6NEF3 574 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 OPLAHO14841 1288 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 HOXA7P31268 230 aaPredicted RBP23.84■■□□□ 1.41
SND1-214ENST00000489417 ME1P48163 572 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 MOGSQ13724 837 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 MCTP2Q6DN12 878 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 CPXCR1Q8N123 301 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 REPS2Q8NFH8 660 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 GPT2Q8TD30 523 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 PGBD1Q96JS3 809 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 AGTPBP1Q9UPW5 1226 aa23.84■■□□□ 1.41
SND1-214ENST00000489417 SPDYE16A6NNV3 312 aaPredicted RBP23.83■■□□□ 1.4
SND1-214ENST00000489417 WNT7AO00755 349 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 MEIS2O14770 477 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 KIF3CO14782 793 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 BMP15O95972 392 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 OAZ1P54368 228 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 KLHL40Q2TBA0 621 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 USP17L6PQ6QN14 398 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 JMYQ8N9B5 988 aa23.83■■□□□ 1.4
SND1-214ENST00000489417 PPP6R2O75170 966 aa23.82■■□□□ 1.4
SND1-214ENST00000489417 AP3B2Q13367 1082 aa23.82■■□□□ 1.4
SND1-214ENST00000489417 ZNF174Q15697 407 aa23.82■■□□□ 1.4
SND1-214ENST00000489417 TPRNQ4KMQ1 711 aa23.82■■□□□ 1.4
SND1-214ENST00000489417 TBCKQ8TEA7 893 aa23.82■■□□□ 1.4
SND1-214ENST00000489417 PCDHA7Q9UN72 937 aa23.82■■□□□ 1.4
SND1-214ENST00000489417 MORC2Q9Y6X9 1032 aaPredicted RBP23.82■■□□□ 1.4
SND1-214ENST00000489417 PASKQ96RG2 1323 aa23.81■■□□□ 1.4
SND1-214ENST00000489417 PIK3CDO00329 1044 aa23.81■■□□□ 1.4
SND1-214ENST00000489417 ALAS1P13196 640 aa23.81■■□□□ 1.4
SND1-214ENST00000489417 MARCKSP29966 332 aaPredicted RBP23.81■■□□□ 1.4
SND1-214ENST00000489417 IRX3P78415 501 aaPredicted RBP23.81■■□□□ 1.4
SND1-214ENST00000489417 PABPC4Q13310 644 aaKnown RBP eCLIP23.81■■□□□ 1.43e-8■■□□□ 14.5
SND1-214ENST00000489417 NEK8Q86SG6 692 aa23.81■■□□□ 1.4
SND1-214ENST00000489417 GCOM1H8Y6P7 765 aaPredicted RBP23.8■■□□□ 1.4
SND1-214ENST00000489417 FOSP01100 380 aaPredicted RBP23.8■■□□□ 1.4
SND1-214ENST00000489417 POLR2MP0CAP2 368 aa23.8■■□□□ 1.4
SND1-214ENST00000489417 GTF2A2P52657 109 aa23.8■■□□□ 1.4
SND1-214ENST00000489417 HUNKP57058 714 aa23.8■■□□□ 1.4
SND1-214ENST00000489417 GPAT2Q6NUI2 795 aa23.8■■□□□ 1.4
SND1-214ENST00000489417 ANO3Q9BYT9 981 aa23.8■■□□□ 1.4
SND1-214ENST00000489417 ATP2A1O14983 1001 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 CFBP00751 764 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 CETPP11597 493 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 MCM7P33993 719 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 SPRYD7Q5W111 196 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 SMC1BQ8NDV3 1235 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 CLEC4DQ8WXI8 215 aa23.79■■□□□ 1.4
SND1-214ENST00000489417 ASCC2Q9H1I8 757 aaPredicted RBP23.79■■□□□ 1.4
SND1-214ENST00000489417 ZNF214Q9UL59 606 aaPredicted RBP23.79■■□□□ 1.4
SND1-214ENST00000489417 ZBTB48P10074 688 aaPredicted RBP23.78■■□□□ 1.4
SND1-214ENST00000489417 OSBPP22059 807 aa23.78■■□□□ 1.4
SND1-214ENST00000489417 HOXA13P31271 388 aaPredicted RBP23.78■■□□□ 1.4
SND1-214ENST00000489417 TMEM132BQ14DG7 1078 aa23.78■■□□□ 1.4
SND1-214ENST00000489417 LETM2Q2VYF4 491 aa23.78■■□□□ 1.4
SND1-214ENST00000489417 ADALQ6DHV7 355 aa23.78■■□□□ 1.4
SND1-214ENST00000489417 MCF2L2Q86YR7 1114 aa23.78■■□□□ 1.4
SND1-214ENST00000489417 P2RX7Q99572 595 aaKnown RBP23.78■■□□□ 1.4
SND1-214ENST00000489417 A0A0G2JMZ2 1700 aa23.78■■□□□ 1.4
SND1-214ENST00000489417 COL11A1P12107 1806 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms