RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
SMTN-218ENST00000489337 GDF11O95390 407 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
SMTN-218ENST00000489337 GBP6Q6ZN66 633 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
SMTN-218ENST00000489337 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 BBOX1O75936 387 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMTN-218ENST00000489337 GNGT1P63211 74 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 TMTC1Q8IUR5 882 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 ZFPM1Q8IX07 1006 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 HINFPQ9BQA5 517 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
SMTN-218ENST00000489337 ADRA2BP18089 450 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 CERS5Q8N5B7 392 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 MED15Q96RN5 788 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 RIOK1Q9BRS2 568 aaKnown RBP13.13□□□□□ -0.31
SMTN-218ENST00000489337 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
SMTN-218ENST00000489337 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 FAM237AA0A1B0GTK4 181 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 XBP1P17861 261 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
SMTN-218ENST00000489337 ZNF654Q8IZM8 581 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 NUP88Q99567 741 aaPredicted RBP13.12□□□□□ -0.31
SMTN-218ENST00000489337 MYO1AQ9UBC5 1043 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
SMTN-218ENST00000489337 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
SMTN-218ENST00000489337 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 MORC3Q14149 939 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 GIMAP7Q8NHV1 300 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 MASTLQ96GX5 879 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 PLIN2Q99541 437 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
SMTN-218ENST00000489337 TJP1Q07157 1748 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
SMTN-218ENST00000489337 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
SMTN-218ENST00000489337 GYPCP04921 128 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 NPR1P16066 1061 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 RDXP35241 583 aaKnown RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 SLC16A2P36021 539 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 AMPD2Q01433 879 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 STAMQ92783 540 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 CABS1Q96KC9 395 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 MMS19Q96T76 1030 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 ADD3Q9UEY8 706 aaKnown RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 NDUFAB1O14561 156 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 ERCC5P28715 1186 aaPredicted RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 ALDH1B1P30837 517 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 CEP131Q9UPN4 1083 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 MYH8P13535 1937 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 ECE2O60344 883 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 GRIN1Q05586 938 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 SPATA1Q5VX52 437 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
SMTN-218ENST00000489337 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 RASSF8Q8NHQ8 419 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
SMTN-218ENST00000489337 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
SMTN-218ENST00000489337 SH2B2O14492 632 aaPredicted RBP13.1□□□□□ -0.31
SMTN-218ENST00000489337 N4BP3O15049 544 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 PLSCR1O15162 318 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 CDC25AP30304 524 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 ARHGAP25P42331 645 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 ERVK-24P63145 666 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 TRIML1Q8N9V2 468 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 MYO1FO00160 1098 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 AFMP43652 599 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 DLK2Q6UY11 383 aa13.1□□□□□ -0.31
SMTN-218ENST00000489337 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms