RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SYTL4Q96C24 671 aaPredicted RBP4.46□□□□□ -1.7
PRPF4-203ENST00000488937 ANAPC16Q96DE5 110 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 SENP7Q9BQF6 1050 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 SRRTQ9BXP5 876 aaKnown RBP4.46□□□□□ -1.7
PRPF4-203ENST00000488937 ARNT2Q9HBZ2 717 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 LUC7LQ9NQ29 371 aaKnown RBP4.46□□□□□ -1.7
PRPF4-203ENST00000488937 PNMA2Q9UL42 364 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 FITM1A5D6W6 292 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 CCDC85CA6NKD9 419 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 ALG1L2C9J202 215 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 TRIM37O94972 964 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 LDHAP00338 332 aaKnown RBP4.45□□□□□ -1.7
PRPF4-203ENST00000488937 C6P13671 934 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 ACVRL1P37023 503 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 ADAM17P78536 824 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 DHX8Q14562 1220 aaKnown RBP4.45□□□□□ -1.7
PRPF4-203ENST00000488937 RTP5Q14D33 572 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 ZNF605Q86T29 641 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 RELL1Q8IUW5 271 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 SLITRK4Q8IW52 837 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 ZNF512BQ96KM6 892 aaPredicted RBP4.45□□□□□ -1.7
PRPF4-203ENST00000488937 RNF32Q9H0A6 362 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 CHST12Q9NRB3 414 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 ZSWIM5Q9P217 1185 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 CYP8B1Q9UNU6 501 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 R3HCC1Q9Y3T6 440 aaKnown RBP4.45□□□□□ -1.7
PRPF4-203ENST00000488937 RPS6KL1Q9Y6S9 549 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 WASHC2CQ9Y4E1 1318 aa4.45□□□□□ -1.7
PRPF4-203ENST00000488937 DNAJC25-GNG10A0A024R161 153 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 CCDC189A1A4V9 331 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 PRR33A8MZF0 331 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 PLIN1O60240 522 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 SLITRK5O94991 958 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 FGAP02671 866 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 NTF4P34130 210 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 GIPRP48546 466 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 RPS26P62854 115 aaKnown RBP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 MCL1Q07820 350 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 HDAC1Q13547 482 aaPredicted RBP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 FAM50AQ14320 339 aaKnown RBP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 RALGPS1Q5JS13 557 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 LLGL2Q6P1M3 1020 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 MPRIPQ6WCQ1 1025 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 DDX42Q86XP3 938 aaKnown RBP eCLIP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 ZFPM1Q8IX07 1006 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 PHC3Q8NDX5 983 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 PIWIL2Q8TC59 973 aaKnown RBP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 GAL3ST3Q96A11 431 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 ZNF669Q96BR6 464 aaPredicted RBP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 CBX8Q9HC52 389 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 SUPT16HQ9Y5B9 1047 aaKnown RBP4.44□□□□□ -1.7
PRPF4-203ENST00000488937 CD2APQ9Y5K6 639 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 TNFRSF18Q9Y5U5 241 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 PTCH2Q9Y6C5 1203 aa4.44□□□□□ -1.7
PRPF4-203ENST00000488937 A0A087X0B3 334 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 MINDY4BA8MYZ0 360 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 ASMTLO95671 621 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 RLBP1P12271 317 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 PI3P19957 117 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 GBP2P32456 591 aaPredicted RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 CAP2P40123 477 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 CRKP46108 304 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 ERVFC1P60507 584 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 RING1Q06587 406 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 FOXD4Q12950 439 aaPredicted RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 SNX17Q15036 470 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 LRRC14Q15048 493 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 PPP2R5AQ15172 486 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 NR0B2Q15466 257 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 CCDC85BQ15834 202 aaPredicted RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 AGMOQ6ZNB7 445 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 WDR75Q8IWA0 830 aaKnown RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 GRIN3AQ8TCU5 1115 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 CPLX3Q8WVH0 158 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 ELMO3Q96BJ8 720 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 INTS4Q96HW7 963 aaKnown RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 SIGLEC10Q96LC7 697 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 MIPEPQ99797 713 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 LRRC3Q9BY71 257 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 TRIT1Q9H3H1 467 aaKnown RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 ZNF552Q9H707 407 aaPredicted RBP4.43□□□□□ -1.7
PRPF4-203ENST00000488937 ACTR10Q9NZ32 417 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 UBP1Q9NZI7 540 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 IRAK3Q9Y616 596 aa4.43□□□□□ -1.7
PRPF4-203ENST00000488937 DCDC2CA8MYV0 355 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 PRICKLE3O43900 615 aaPredicted RBP4.42□□□□□ -1.7
PRPF4-203ENST00000488937 WDHD1O75717 1129 aaPredicted RBP4.42□□□□□ -1.7
PRPF4-203ENST00000488937 CBX7O95931 251 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 SCGB1D2O95969 90 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 MYL1P05976 194 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 TACR2P21452 398 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 PDE6BP35913 854 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 LIG3P49916 1009 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 ATXN1P54253 815 aaKnown RBP4.42□□□□□ -1.7
PRPF4-203ENST00000488937 OS9Q13438 667 aaPredicted RBP4.42□□□□□ -1.7
PRPF4-203ENST00000488937 LRRC41Q15345 812 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 SYCP2LQ5T4T6 812 aa4.42□□□□□ -1.7
PRPF4-203ENST00000488937 TTBK2Q6IQ55 1244 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms