RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CNOT8Q9UFF9 292 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 B4DLN1 442 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 ZNF213O14771 459 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 NBPF9Q3BBW0 867 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 IQCKQ8N0W5 287 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 ZNF513Q8N8E2 541 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 DSCC1Q9BVC3 393 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 SNX12Q9UMY4 172 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 GOLGA6L10A6NI86 522 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
MCF2L-229ENST00000488765 MAP3K13O43283 966 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 RWDD2BP57060 319 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 ITGB3BPQ13352 177 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-229ENST00000488765 ZC3H12AQ5D1E8 599 aaKnown RBP17.93■□□□□ 0.46
MCF2L-229ENST00000488765 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 OSBPL9Q96SU4 736 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 JCADQ9P266 1359 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 PDHA1P08559 390 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 ARID4AP29374 1257 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-229ENST00000488765 RPS6KA3P51812 740 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 TCP11X2Q5H9J9 407 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 MIS18BP1Q6P0N0 1132 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 NCOA7Q8NI08 942 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 SYMPKQ92797 1274 aaKnown RBP17.93■□□□□ 0.46
MCF2L-229ENST00000488765 CCDC51Q96ER9 411 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 PUS7LQ9H0K6 701 aaKnown RBP17.93■□□□□ 0.46
MCF2L-229ENST00000488765 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
MCF2L-229ENST00000488765 GOLGA8AA7E2F4 631 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 SMIM24O75264 130 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 PECAM1P16284 738 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-229ENST00000488765 PTPREP23469 700 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 ZMYM1Q5SVZ6 1142 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 CDCA2Q69YH5 1023 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-229ENST00000488765 IQCEQ6IPM2 695 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 RAPGEF5Q92565 580 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.92■□□□□ 0.46
MCF2L-229ENST00000488765 C15orf41Q9Y2V0 281 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 WNT7AO00755 349 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 ZNF263O14978 683 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 ADAMTS2O95450 1211 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 KCNJ2P63252 427 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 ZNF174Q15697 407 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 EMBQ6PCB8 327 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 CCDC63Q8NA47 563 aa17.92■□□□□ 0.46
MCF2L-229ENST00000488765 HOXB7P09629 217 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 PAFAH1B1P43034 410 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 KSR1Q8IVT5 923 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 SYNE4Q8N205 404 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 RPGRIP1Q96KN7 1286 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 NUCKS1Q9H1E3 243 aaKnown RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 MYH10P35580 1976 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 EPB41P11171 864 aaKnown RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 PMS1P54277 932 aaKnown RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 BYSLQ13895 437 aaKnown RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 CCDC170Q8IYT3 715 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 SLC17A8Q8NDX2 589 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 UBLCP1Q8WVY7 318 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 ACTR5Q9H9F9 607 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 RNF113AO15541 343 aaKnown RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 RAB27AP51159 221 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 KRT83P78385 493 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 NT5DC1Q5TFE4 455 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 CCDC50Q8IVM0 306 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 MB21D2Q8IYB1 491 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-229ENST00000488765 CCDC42Q96M95 316 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 CD2APQ9Y5K6 639 aa17.91■□□□□ 0.46
MCF2L-229ENST00000488765 MGRN1O60291 552 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 EVI5O60447 810 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 FTCDO95954 541 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 GNAT1P11488 350 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 SAFBQ15424 915 aaKnown RBP eCLIP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 CHD2O14647 1828 aaKnown RBP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 FOXP2O15409 715 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 MAGOHP61326 146 aaKnown RBP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 GKAP1Q5VSY0 366 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 CASKIN2Q8WXE0 1202 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 MAGOHBQ96A72 148 aaKnown RBP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
MCF2L-229ENST00000488765 FMN2Q9NZ56 1722 aa17.9■□□□□ 0.46
MCF2L-229ENST00000488765 LTN1O94822 1766 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 GCOM1H8Y6P7 765 aaPredicted RBP17.89■□□□□ 0.46
MCF2L-229ENST00000488765 ZBTB43O43298 467 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 MYZAPP0CAP1 466 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 IFNAR2P48551 515 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 SPA17Q15506 151 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 RCSD1Q6JBY9 416 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 APOA5Q6Q788 366 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 ERICH1Q86X53 443 aa17.89■□□□□ 0.46
MCF2L-229ENST00000488765 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 PRDM1O75626 825 aa17.89■□□□□ 0.45
MCF2L-229ENST00000488765 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 EARS2Q5JPH6 523 aaKnown RBP17.89■□□□□ 0.45
MCF2L-229ENST00000488765 MEX3CQ5U5Q3 659 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms