RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 GNEQ9Y223 722 aaKnown RBP25.29■■□□□ 1.64
RPL35-203ENST00000487431 TIMP1P01033 207 aa25.28■■□□□ 1.64
RPL35-203ENST00000487431 ICAM1P05362 532 aa25.28■■□□□ 1.64
RPL35-203ENST00000487431 SNAP25P60880 206 aa25.28■■□□□ 1.64
RPL35-203ENST00000487431 TNFAIP2Q03169 654 aa25.28■■□□□ 1.64
RPL35-203ENST00000487431 CCDC174Q6PII3 467 aa25.28■■□□□ 1.64
RPL35-203ENST00000487431 SMC5Q8IY18 1101 aa25.28■■□□□ 1.64
RPL35-203ENST00000487431 A0A0U1RQG5 324 aaPredicted RBP25.27■■□□□ 1.64
RPL35-203ENST00000487431 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.27■■□□□ 1.64
RPL35-203ENST00000487431 ARVCFO00192 962 aa25.27■■□□□ 1.64
RPL35-203ENST00000487431 TOP1P11387 765 aaKnown RBP25.27■■□□□ 1.64
RPL35-203ENST00000487431 PCP11498 1178 aaKnown RBP25.27■■□□□ 1.64
RPL35-203ENST00000487431 ZNF589Q86UQ0 364 aaPredicted RBP25.27■■□□□ 1.64
RPL35-203ENST00000487431 MORC4Q8TE76 937 aa25.27■■□□□ 1.64
RPL35-203ENST00000487431 FAM161BQ96MY7 647 aa25.27■■□□□ 1.64
RPL35-203ENST00000487431 TMEM47Q9BQJ4 181 aa25.27■■□□□ 1.64
RPL35-203ENST00000487431 SEMA6BQ9H3T3 888 aa25.27■■□□□ 1.64
RPL35-203ENST00000487431 NMIQ13287 307 aaPredicted RBP25.26■■□□□ 1.63
RPL35-203ENST00000487431 FAM126BQ8IXS8 530 aa25.26■■□□□ 1.63
RPL35-203ENST00000487431 RNPC3Q96LT9 517 aaKnown RBP25.26■■□□□ 1.63
RPL35-203ENST00000487431 CCPG1Q9ULG6 757 aa25.26■■□□□ 1.63
RPL35-203ENST00000487431 CCDC171Q6TFL3 1326 aa25.26■■□□□ 1.63
RPL35-203ENST00000487431 CCDC96Q2M329 555 aa25.25■■□□□ 1.63
RPL35-203ENST00000487431 TTBK2Q6IQ55 1244 aa25.25■■□□□ 1.63
RPL35-203ENST00000487431 MFSD5Q6N075 450 aa25.25■■□□□ 1.63
RPL35-203ENST00000487431 LNPKQ9C0E8 428 aa25.25■■□□□ 1.63
RPL35-203ENST00000487431 TTYH1Q9H313 450 aaPredicted RBP25.25■■□□□ 1.63
RPL35-203ENST00000487431 TMEM265A0A087WTH1 108 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 RRP12Q5JTH9 1297 aaKnown RBP25.24■■□□□ 1.63
RPL35-203ENST00000487431 SYDE2Q5VT97 1194 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 TAPT1Q6NXT6 567 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 TLK2Q86UE8 772 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 SLC43A3Q8NBI5 491 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 TTC14Q96N46 770 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 CDX2Q99626 313 aaPredicted RBP25.24■■□□□ 1.63
RPL35-203ENST00000487431 OSBPL3Q9H4L5 887 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 TOMM22Q9NS69 142 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 MTMR7Q9Y216 660 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 Q9Y3F1 56 aa25.24■■□□□ 1.63
RPL35-203ENST00000487431 LOC102724159A0A0B4J2E5 919 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 CABYRO75952 493 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 CD4P01730 458 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 PDHBP11177 359 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 SMPD1P17405 629 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 SLC16A2P36021 539 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 BEX3Q00994 111 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 PWP2Q15269 919 aaKnown RBP25.23■■□□□ 1.63
RPL35-203ENST00000487431 AKNAD1Q5T1N1 836 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 IQSEC1Q6DN90 963 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 VTA1Q9NP79 307 aa25.23■■□□□ 1.63
RPL35-203ENST00000487431 SNHG28P0DPA3 235 aa25.22■■□□□ 1.63
RPL35-203ENST00000487431 NSMFQ6X4W1 530 aa25.22■■□□□ 1.63
RPL35-203ENST00000487431 VTI1AQ96AJ9 217 aa25.22■■□□□ 1.63
RPL35-203ENST00000487431 DDX49Q9Y6V7 483 aaKnown RBP25.22■■□□□ 1.63
RPL35-203ENST00000487431 TRIM6-TRIM34B2RNG4 842 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 MFAP1P55081 439 aaKnown RBP25.21■■□□□ 1.63
RPL35-203ENST00000487431 HAND2P61296 217 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 FSCN1Q16658 493 aaKnown RBP25.21■■□□□ 1.63
RPL35-203ENST00000487431 MFSD6Q6ZSS7 791 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 TBC1D10CQ8IV04 446 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 FBXO16Q8IX29 292 aaPredicted RBP25.21■■□□□ 1.63
RPL35-203ENST00000487431 SEZ6LQ9BYH1 1024 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 RWDD1Q9H446 243 aaPredicted RBP25.21■■□□□ 1.63
RPL35-203ENST00000487431 PDGFCQ9NRA1 345 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 PNMA2Q9UL42 364 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 MYH6P13533 1939 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 PRUNE2Q8WUY3 3088 aa25.21■■□□□ 1.63
RPL35-203ENST00000487431 FRMPD2Q68DX3 1309 aaPredicted RBP25.2■■□□□ 1.62
RPL35-203ENST00000487431 TLR3O15455 904 aaKnown RBP25.2■■□□□ 1.62
RPL35-203ENST00000487431 SDSP20132 328 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 NT5C2P49902 561 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 ZNF543Q08ER8 600 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 PPIGQ13427 754 aaKnown RBP eCLIP25.2■■□□□ 1.62
RPL35-203ENST00000487431 BAATQ14032 418 aaPredicted RBP25.2■■□□□ 1.62
RPL35-203ENST00000487431 RASIP1Q5U651 963 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 CXCL17Q6UXB2 119 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 NOL8Q76FK4 1167 aaKnown RBP25.2■■□□□ 1.62
RPL35-203ENST00000487431 C16orf59Q7L2K0 433 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 PLEKHM2Q8IWE5 1019 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 PURBQ96QR8 312 aaKnown RBP25.2■■□□□ 1.62
RPL35-203ENST00000487431 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.2■■□□□ 1.626e-7■■■■□ 21.9
RPL35-203ENST00000487431 AP5M1Q9H0R1 490 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 GPCPD1Q9NPB8 672 aa25.2■■□□□ 1.62
RPL35-203ENST00000487431 ADD3Q9UEY8 706 aaKnown RBP25.2■■□□□ 1.62
RPL35-203ENST00000487431 GBF1Q92538 1859 aa25.19■■□□□ 1.62
RPL35-203ENST00000487431 NFIBO00712 420 aa25.19■■□□□ 1.62
RPL35-203ENST00000487431 ALDH5A1P51649 535 aaPredicted RBP25.19■■□□□ 1.62
RPL35-203ENST00000487431 CHD1LQ86WJ1 897 aa25.19■■□□□ 1.62
RPL35-203ENST00000487431 CLEC4DQ8WXI8 215 aa25.19■■□□□ 1.62
RPL35-203ENST00000487431 RILPL2Q969X0 211 aa25.19■■□□□ 1.62
RPL35-203ENST00000487431 RNF41Q9H4P4 317 aaPredicted RBP25.19■■□□□ 1.62
RPL35-203ENST00000487431 CUL9Q8IWT3 2517 aa25.19■■□□□ 1.62
RPL35-203ENST00000487431 GRIN2DO15399 1336 aa25.18■■□□□ 1.62
RPL35-203ENST00000487431 WDR19Q8NEZ3 1342 aa25.18■■□□□ 1.62
RPL35-203ENST00000487431 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.18■■□□□ 1.62
RPL35-203ENST00000487431 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.18■■□□□ 1.62
RPL35-203ENST00000487431 DYNC1LI2O43237 492 aaPredicted RBP25.18■■□□□ 1.62
RPL35-203ENST00000487431 PTGS1P23219 599 aa25.18■■□□□ 1.62
RPL35-203ENST00000487431 NUCB1Q02818 461 aa25.18■■□□□ 1.62
RPL35-203ENST00000487431 TMEM240Q5SV17 173 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms