RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 FSD1Q9BTV5 496 aa19.23■□□□□ 0.67
SRRT-212ENST00000487311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.23■□□□□ 0.67
SRRT-212ENST00000487311 MROH7Q68CQ1 1323 aa19.23■□□□□ 0.67
SRRT-212ENST00000487311 ALAS1P13196 640 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 SMPD1P17405 629 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 PPIGQ13427 754 aaKnown RBP eCLIP19.22■□□□□ 0.672e-6■□□□□ 10.7
SRRT-212ENST00000487311 RCSD1Q6JBY9 416 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 CCDC174Q6PII3 467 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 CXCL17Q6UXB2 119 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 NOL8Q76FK4 1167 aaKnown RBP19.22■□□□□ 0.67
SRRT-212ENST00000487311 FAM160B2Q86V87 743 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 SLC43A3Q8NBI5 491 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 TIFAQ96CG3 184 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 PBX4Q9BYU1 374 aa19.22■□□□□ 0.67
SRRT-212ENST00000487311 DYNC1LI2O43237 492 aaPredicted RBP19.21■□□□□ 0.67
SRRT-212ENST00000487311 PLA2G6O60733 806 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
SRRT-212ENST00000487311 VPS53Q5VIR6 699 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 TAPT1Q6NXT6 567 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 EEPD1Q7L9B9 569 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 PRDM6Q9NQX0 595 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 PRR12Q9ULL5 1215 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 STX8Q9UNK0 236 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 UMODL1Q5DID0 1318 aa19.21■□□□□ 0.67
SRRT-212ENST00000487311 ERC2O15083 957 aa19.2■□□□□ 0.66
SRRT-212ENST00000487311 SLC3A2P08195 630 aaKnown RBP19.2■□□□□ 0.66
SRRT-212ENST00000487311 LRRFIP1Q32MZ4 808 aaKnown RBP19.2■□□□□ 0.66
SRRT-212ENST00000487311 TTBK2Q6IQ55 1244 aa19.2■□□□□ 0.66
SRRT-212ENST00000487311 TMEM199Q8N511 208 aa19.2■□□□□ 0.66
SRRT-212ENST00000487311 CYP39A1Q9NYL5 469 aa19.2■□□□□ 0.66
SRRT-212ENST00000487311 CXXC1Q9P0U4 656 aaPredicted RBP19.2■□□□□ 0.66
SRRT-212ENST00000487311 MTMR7Q9Y216 660 aa19.2■□□□□ 0.66
SRRT-212ENST00000487311 ASB14A6NK59 587 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 TSPY2A6NKD2 308 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 NOVP48745 357 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 FSCN1Q16658 493 aaKnown RBP19.19■□□□□ 0.66
SRRT-212ENST00000487311 TKFCQ3LXA3 575 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 TLK2Q86UE8 772 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 FBXO16Q8IX29 292 aaPredicted RBP19.19■□□□□ 0.66
SRRT-212ENST00000487311 TRPV6Q9H1D0 765 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
SRRT-212ENST00000487311 MUC3AQ02505 3323 aa19.18■□□□□ 0.66
SRRT-212ENST00000487311 TLR3O15455 904 aaKnown RBP19.18■□□□□ 0.66
SRRT-212ENST00000487311 SLC16A2P36021 539 aa19.18■□□□□ 0.66
SRRT-212ENST00000487311 PSMC6P62333 389 aa19.18■□□□□ 0.66
SRRT-212ENST00000487311 VWCEQ96DN2 955 aa19.18■□□□□ 0.66
SRRT-212ENST00000487311 IL23AQ9NPF7 189 aa19.18■□□□□ 0.66
SRRT-212ENST00000487311 B4GALT4O60513 344 aa19.17■□□□□ 0.66
SRRT-212ENST00000487311 RANBP6O60518 1105 aaKnown RBP19.17■□□□□ 0.66
SRRT-212ENST00000487311 MX1P20591 662 aa19.17■□□□□ 0.66
SRRT-212ENST00000487311 IQSEC1Q6DN90 963 aa19.17■□□□□ 0.66
SRRT-212ENST00000487311 HERVK_113Q902F9 699 aa19.17■□□□□ 0.66
SRRT-212ENST00000487311 PRDM12Q9H4Q4 367 aa19.17■□□□□ 0.66
SRRT-212ENST00000487311 ANAPC4Q9UJX5 808 aa19.17■□□□□ 0.66
SRRT-212ENST00000487311 FGRP09769 529 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 CCL23P55773 120 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 BAATQ14032 418 aaPredicted RBP19.16■□□□□ 0.66
SRRT-212ENST00000487311 ADGRE1Q14246 886 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 NSMFQ6X4W1 530 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 KIAA1211Q6ZU35 1233 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 PPM1EQ8WY54 764 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 AP5M1Q9H0R1 490 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 HIPK3Q9H422 1215 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 CCPG1Q9ULG6 757 aa19.16■□□□□ 0.66
SRRT-212ENST00000487311 LCTP09848 1927 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 CHD9Q3L8U1 2897 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 MYO9BQ13459 2157 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 CABYRO75952 493 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 FGBP02675 491 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 ICAM1P05362 532 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 PSRC1Q6PGN9 363 aaPredicted RBP19.15■□□□□ 0.66
SRRT-212ENST00000487311 OTOP2Q7RTS6 562 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 MORC4Q8TE76 937 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 NOC4LQ9BVI4 516 aaKnown RBP19.15■□□□□ 0.66
SRRT-212ENST00000487311 WNT8AQ9H1J5 351 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 RANBP17Q9H2T7 1088 aaKnown RBP19.15■□□□□ 0.66
SRRT-212ENST00000487311 YBX2Q9Y2T7 364 aaKnown RBP19.15■□□□□ 0.66
SRRT-212ENST00000487311 Q9Y3F1 56 aa19.15■□□□□ 0.66
SRRT-212ENST00000487311 NFIBO00712 420 aa19.14■□□□□ 0.65
SRRT-212ENST00000487311 FGAP02671 866 aa19.14■□□□□ 0.65
SRRT-212ENST00000487311 CCDC96Q2M329 555 aa19.14■□□□□ 0.65
SRRT-212ENST00000487311 BTNL9Q6UXG8 535 aa19.14■□□□□ 0.65
SRRT-212ENST00000487311 NKX2-4Q9H2Z4 354 aa19.14■□□□□ 0.65
SRRT-212ENST00000487311 ORC4O43929 436 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 RABGGTBP53611 331 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 ALX1Q15699 326 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 PPP4R3BQ5MIZ7 849 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 DCAF4Q8WV16 495 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 FAM227BQ96M60 508 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 TMEM47Q9BQJ4 181 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 GPCPD1Q9NPB8 672 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 FRMPD2Q68DX3 1309 aaPredicted RBP19.13■□□□□ 0.65
SRRT-212ENST00000487311 LRRC37A2A6NM11 1700 aa19.13■□□□□ 0.65
SRRT-212ENST00000487311 ZEB2O60315 1214 aa19.12■□□□□ 0.65
SRRT-212ENST00000487311 MYOGP15173 224 aa19.12■□□□□ 0.65
SRRT-212ENST00000487311 CCDC85BQ15834 202 aaPredicted RBP19.12■□□□□ 0.65
SRRT-212ENST00000487311 DUSP28Q4G0W2 176 aa19.12■□□□□ 0.65
SRRT-212ENST00000487311 RRP12Q5JTH9 1297 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms