RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SYKP43405 635 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 STAT2P52630 851 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 SNW1Q13573 536 aaKnown RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 ZNF174Q15697 407 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 CDC37Q16543 378 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 CAMK4Q16566 473 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 AMHR2Q16671 573 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 QRICH1Q2TAL8 776 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 SUPT20HL1Q3ZLR7 823 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 EARS2Q5JPH6 523 aaKnown RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 C9orf131Q5VYM1 1079 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 SASS6Q6UVJ0 657 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 RBM43Q6ZSC3 357 aaKnown RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 FAM160B2Q86V87 743 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 FBXO11Q86XK2 927 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 TEX2Q8IWB9 1127 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 CDAN1Q8IWY9 1227 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 FMR1NBQ8N0W7 255 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 TRPM4Q8TD43 1214 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 COA7Q96BR5 231 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 FEZ1Q99689 392 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 AMNQ9BXJ7 453 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 AS3MTQ9HBK9 375 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 RIC8AQ9NPQ8 531 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 HOOK1Q9UJC3 728 aaKnown RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 FBXO2Q9UK22 296 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 DDNO94850 711 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ZNF202O95125 648 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 CAVIN2O95810 425 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 MCM7P33993 719 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 EPS15P42566 896 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ECE1P42892 770 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 NDUFA8P51970 172 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 USP14P54578 494 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ATP2C1P98194 919 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 PTGDRQ13258 359 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ZRSR1Q15695 479 aaKnown RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 GPR162Q16538 588 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 INF2Q27J81 1249 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 UVSSAQ2YD98 709 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ARL6IP4Q66PJ3 421 aaKnown RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 SHC4Q6S5L8 630 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 NEK8Q86SG6 692 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ACER1Q8TDN7 264 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 LPAR1Q92633 364 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 DCPSQ96C86 337 aaKnown RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 CLIC6Q96NY7 704 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 PYM1Q9BRP8 204 aaKnown RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 BIN2Q9UBW5 565 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 FEM1BQ9UK73 627 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 HPSEQ9Y251 543 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 PCDHA1Q9Y5I3 950 aa8.02□□□□□ -1.13
SF3A3-206ENST00000487062 ASTN2O75129 1339 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-206ENST00000487062 SCN4AP35499 1836 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 DPYSL4O14531 572 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 WDR46O15213 610 aaKnown RBP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 GRIN3BO60391 1043 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 XRCC6P12956 609 aaKnown RBP eCLIP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 LONP1P36776 959 aaKnown RBP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 TXLNAP40222 546 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 PRPHP41219 470 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 TYRO3Q06418 890 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 ZYXQ15942 572 aaKnown RBP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 NOM1Q5C9Z4 860 aaKnown RBP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 JAKMIP3Q5VZ66 844 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 ILDR2Q71H61 639 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 CKAP2LQ8IYA6 745 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 ELOA2Q8IYF1 753 aaPredicted RBP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 SCYL3Q8IZE3 742 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 TBCKQ8TEA7 893 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 FUCA2Q9BTY2 467 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 KIAA1683Q9H0B3 1180 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 RBSNQ9H1K0 784 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 PSTPIP2Q9H939 334 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 PICK1Q9NRD5 415 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 ZNF112Q9UJU3 913 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 KCNH3Q9ULD8 1083 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 PRR12Q9ULL5 1215 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 SCAF8Q9UPN6 1271 aaKnown RBP8.01□□□□□ -1.13
SF3A3-206ENST00000487062 MYH7BA7E2Y1 1941 aa8.01□□□□□ -1.13
SF3A3-206ENST00000487062 VWA3AA6NCI4 1184 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 ADAMTS3O15072 1205 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 CCNT1O60563 726 aaKnown RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 PPP1R11O60927 126 aaPredicted RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 FOSP01100 380 aaPredicted RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 FDX1P10109 184 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 INPP5BP32019 993 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 CLK2P49760 499 aaKnown RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 HIRAP54198 1017 aaPredicted RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 MAP2K5Q13163 448 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms