RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	PPP1R11	O60927	126 aa	Predicted RBP	10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	PTPRA	P18433	802 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	LIG1	P18858	919 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	CMA1	P23946	247 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	ZNF445	P59923	1031 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	SPP2	Q13103	211 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	ZNF174	Q15697	407 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	EARS2	Q5JPH6	523 aa	Known RBP	10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	KIAA1755	Q5JYT7	1200 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	JAKMIP3	Q5VZ66	844 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	RASGRP4	Q8TDF6	673 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	CDCA5	Q96FF9	252 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	NUP62CL	Q9H1M0	184 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	FAM13B	Q9NYF5	915 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	BIN2	Q9UBW5	565 aa	Predicted RBP	10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	CSAD	Q9Y600	493 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	ZHX2	Q9Y6X8	837 aa		10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.32	□□□□□ -0.76
KIFC1-213	ENST00000486695	SYCE3	A1L190	88 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	GOLGA6L3	A6NEY3	463 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	CTAGE5	O15320	804 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	KIN	O60870	393 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	PTPRE	P23469	700 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	BACE1	P56817	501 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	SNAP25	P60880	206 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	FAM160A1	Q05DH4	1040 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	ORC2	Q13416	577 aa	Predicted RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	MTMR2	Q13614	643 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	TTLL12	Q14166	644 aa	Predicted RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	INF2	Q27J81	1249 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	NOM1	Q5C9Z4	860 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	TEX2	Q8IWB9	1127 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	ZNF579	Q8NAF0	562 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	PRPF38A	Q8NAV1	312 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	FERMT2	Q96AC1	680 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	NAP1L4	Q99733	375 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	SLF1	Q9BQI6	1058 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	TANGO6	Q9C0B7	1094 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	TNMD	Q9H2S6	317 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	RANBP17	Q9H2T7	1088 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	DACT1	Q9NYF0	836 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	TMOD4	Q9NZQ9	345 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	PNMA2	Q9UL42	364 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	SRPRB	Q9Y5M8	271 aa	Known RBP	10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695	SSC5D	A1L4H1	1573 aa		10.31	□□□□□ -0.76
KIFC1-213	ENST00000486695		A0A1B0GVL5	298 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	STK25	O00506	426 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	LAD1	O00515	517 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	ADAMTS3	O15072	1205 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	NR1I2	O75469	434 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	ITGBL1	O95965	494 aa	Predicted RBP	10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	FDX1	P10109	184 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	MCM7	P33993	719 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	PTGDR	Q13258	359 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	USH1G	Q495M9	461 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	CCDC174	Q6PII3	467 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	LRSAM1	Q6UWE0	723 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	ARMC9	Q7Z3E5	817 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	NEK8	Q86SG6	692 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	ANKRD13A	Q8IZ07	590 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	C12orf42	Q96LP6	360 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	CLSTN2	Q9H4D0	955 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	EMILIN3	Q9NT22	766 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	TMEM260	Q9NX78	707 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	FBXO2	Q9UK22	296 aa	Predicted RBP	10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	FZD1	Q9UP38	647 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	MRPL11	Q9Y3B7	192 aa	Known RBP	10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	ABCB11	O95342	1321 aa		10.3	□□□□□ -0.76
KIFC1-213	ENST00000486695	TMEM88B	A6NKF7	163 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	FOXN1	O15353	648 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	ZBED4	O75132	1171 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	FLOT1	O75955	427 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	FOS	P01100	380 aa	Predicted RBP	10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	VCAM1	P19320	739 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	VEGFB	P49765	207 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	ATP2C1	P98194	919 aa	Predicted RBP	10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	AP3B2	Q13367	1082 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	MAP3K11	Q16584	847 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	LETM2	Q2VYF4	491 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	L1TD1	Q5T7N2	865 aa	Known RBP	10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	RESP18	Q5W5W9	173 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	POTED	Q86YR6	584 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	ENGASE	Q8NFI3	743 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	TBCK	Q8TEA7	893 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	CLIC6	Q96NY7	704 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	GOLPH3L	Q9H4A5	285 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	FBXO28	Q9NVF7	368 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	AFG3L2	Q9Y4W6	797 aa		10.29	□□□□□ -0.76
KIFC1-213	ENST00000486695	FAM237A	A0A1B0GTK4	181 aa		10.28	□□□□□ -0.76
KIFC1-213	ENST00000486695	SPDYE3	A6NKU9	549 aa		10.28	□□□□□ -0.76
KIFC1-213	ENST00000486695	CCNT1	O60563	726 aa	Known RBP	10.28	□□□□□ -0.76
KIFC1-213	ENST00000486695	PFKFB1	P16118	471 aa		10.28	□□□□□ -0.76
KIFC1-213	ENST00000486695	SYK	P43405	635 aa		10.28	□□□□□ -0.76
KIFC1-213	ENST00000486695	CLK2	P49760	499 aa	Known RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms