RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 HMGB1P1B2RPK0 211 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PRDM1O75626 825 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 IDH1O75874 414 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 KRT2P35908 639 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 WTAPQ15007 396 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TRADDQ15628 312 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 RRP12Q5JTH9 1297 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TTLL7Q6ZT98 887 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 MREGQ8N565 214 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 FANCBQ8NB91 859 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 STRBPQ96SI9 672 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 NUP58Q9BVL2 599 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 IFIH1Q9BYX4 1025 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 RMND1Q9NWS8 449 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 LRP6O75581 1613 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 hCG_1642624A0A1W2PR95 340 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PPP1R12BO60237 982 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 HEXIM1O94992 359 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 IL17AQ16552 155 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 C1orf131Q8NDD1 294 aaKnown RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TUBGCP2Q9BSJ2 902 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TMBIM4Q9HC24 238 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 SALL4Q9UJQ4 1053 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 IQSEC3Q9UPP2 1182 aaPredicted RBP11.82□□□□□ -0.52
CCDC171-208ENST00000486641 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 LEMD3Q9Y2U8 911 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 PKD1L3Q7Z443 1732 aa11.82□□□□□ -0.52
CCDC171-208ENST00000486641 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 SCTRP47872 440 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 CDK17Q00537 523 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 PAK2Q13177 524 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 NAA25Q14CX7 972 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 PKN1Q16512 942 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 C11orf91Q3C1V1 193 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 IFNL3Q8IZI9 196 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 RETREG2Q8NC44 543 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 CASKIN2Q8WXE0 1202 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 SEC16BQ96JE7 1060 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 TLR10Q9BXR5 811 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 EPB41L4AQ9HCS5 686 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 MAGEC2Q9UBF1 373 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 PLAAQ9Y263 795 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 KIF3CO14782 793 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 MGRN1O60291 552 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 ATP2C2O75185 946 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 SLC8A1P32418 973 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 CCNHP51946 323 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 BYSLQ13895 437 aaKnown RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 ACCSLQ4AC99 568 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 TTC38Q5R3I4 469 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 AKNAD1Q5T1N1 836 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
CCDC171-208ENST00000486641 MFSD6Q6ZSS7 791 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 EID1Q9Y6B2 187 aa11.81□□□□□ -0.52
CCDC171-208ENST00000486641 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 PATL2C9JE40 543 aaKnown RBP11.8□□□□□ -0.52
CCDC171-208ENST00000486641 BACH1O14867 736 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 BMP15O95972 392 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 GCP02774 474 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 TMOD1P28289 359 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-208ENST00000486641 XRCC4Q13426 336 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ALX1Q15699 326 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ZNF654Q8IZM8 581 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ALS2CR12Q96Q35 445 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 KRT23Q9C075 422 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 NAPBQ9H115 298 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 MYH6P13533 1939 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 AKAP11Q9UKA4 1901 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 ATRNO75882 1429 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
CCDC171-208ENST00000486641 FER1L4A9Z1Z3 1794 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 TCRBV5S4A2TA0A5A2 114 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 CLSTN1O94985 981 aa11.8□□□□□ -0.52
CCDC171-208ENST00000486641 PDE6AP16499 860 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms