RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 INTS3Q68E01 1043 aaKnown RBP7.43□□□□□ -1.22
USP41-204ENST00000486536 SPATC1Q76KD6 591 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 HDXQ7Z353 690 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 MARCH10Q8NA82 808 aaPredicted RBP7.43□□□□□ -1.22
USP41-204ENST00000486536 ST13P5Q8NFI4 369 aaPredicted RBP7.43□□□□□ -1.22
USP41-204ENST00000486536 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 TMEM40Q8WWA1 233 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 PIGBQ92521 554 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 PLPPR2Q96GM1 343 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 CORO1BQ9BR76 489 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 DDX21Q9NR30 783 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP41-204ENST00000486536 HYPKQ9NX55 129 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 ZMYM5Q9UJ78 669 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 BCL9O00512 1426 aa7.43□□□□□ -1.22
USP41-204ENST00000486536 KDM3BQ7LBC6 1761 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
USP41-204ENST00000486536 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
USP41-204ENST00000486536 NEURL1BA8MQ27 555 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 MARCH6O60337 910 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 ECEL1O95672 775 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 ALAS2P22557 587 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 CCT4P50991 539 aaKnown RBP7.42□□□□□ -1.22
USP41-204ENST00000486536 SSRP1Q08945 709 aaKnown RBP7.42□□□□□ -1.22
USP41-204ENST00000486536 LAPTM4AQ15012 233 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
USP41-204ENST00000486536 LRFN4Q6PJG9 635 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 ITPRIPQ8IWB1 547 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 TMEM57Q8N5G2 664 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 CCDC86Q9H6F5 360 aaKnown RBP7.42□□□□□ -1.22
USP41-204ENST00000486536 KRT82Q9NSB4 513 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 CHPF2Q9P2E5 772 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 TNNQ9UQP3 1299 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 BRWD3Q6RI45 1802 aa7.42□□□□□ -1.22
USP41-204ENST00000486536 SLC22A31A6NKX4 558 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 MAOBP27338 520 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 BAG6P46379 1132 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 MASP1P48740 699 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 GRIK5Q16478 980 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 TAF7LQ5H9L4 462 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 FAM117BQ6P1L5 589 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 TXNDC11Q6PKC3 985 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 UNC5AQ6ZN44 842 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 G2E3Q7L622 706 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 TAB3Q8N5C8 712 aaPredicted RBP7.41□□□□□ -1.22
USP41-204ENST00000486536 SMARCC1Q92922 1105 aaPredicted RBP7.41□□□□□ -1.22
USP41-204ENST00000486536 WNT8BQ93098 351 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 ZNF669Q96BR6 464 aaPredicted RBP7.41□□□□□ -1.22
USP41-204ENST00000486536 ATG4CQ96DT6 458 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 FEZ1Q99689 392 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 METTL14Q9HCE5 456 aaKnown RBP7.41□□□□□ -1.22
USP41-204ENST00000486536 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
USP41-204ENST00000486536 ATG3Q9NT62 314 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 ZBTB40Q9NUA8 1239 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 GMIPQ9P107 970 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 REV1Q9UBZ9 1251 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
USP41-204ENST00000486536 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 SCN11AQ9UI33 1791 aa7.41□□□□□ -1.22
USP41-204ENST00000486536 PRAMEF22A3QJZ6 481 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 UPK3BL1B0FP48 263 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 UPK3BL2E5RIL1 263 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 ZNF862O60290 1169 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 DDX58O95786 925 aaKnown RBP7.4□□□□□ -1.22
USP41-204ENST00000486536 PLCG1P19174 1290 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 MAP2K3P46734 347 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 GAS6Q14393 721 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 MRM1Q6IN84 353 aaKnown RBP7.4□□□□□ -1.22
USP41-204ENST00000486536 EEPD1Q7L9B9 569 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 SYTL4Q96C24 671 aaPredicted RBP7.4□□□□□ -1.22
USP41-204ENST00000486536 PHAXQ9H814 394 aaKnown RBP7.4□□□□□ -1.22
USP41-204ENST00000486536 OSGEPQ9NPF4 335 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 ASAP1Q9ULH1 1129 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 STARD13Q9Y3M8 1113 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 USP16Q9Y5T5 823 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 PXDNLA1KZ92 1463 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 KCPQ6ZWJ8 1503 aa7.4□□□□□ -1.22
USP41-204ENST00000486536 SHANK3Q9BYB0 1731 aa7.4□□□□□ -1.23
USP41-204ENST00000486536 SIPA1L3O60292 1781 aaPredicted RBP7.4□□□□□ -1.23
USP41-204ENST00000486536 THSD7AQ9UPZ6 1657 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 IBTKQ9P2D0 1353 aaPredicted RBP7.39□□□□□ -1.23
USP41-204ENST00000486536 LTBP3Q9NS15 1303 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 FSCN2O14926 492 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 STARD3NLO95772 234 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 ACRP10323 421 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 NME1P15531 152 aaKnown RBP7.39□□□□□ -1.23
USP41-204ENST00000486536 AMPD3Q01432 767 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 NCAPHQ15003 741 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 TCEA2Q15560 299 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 ZYXQ15942 572 aaKnown RBP7.39□□□□□ -1.23
USP41-204ENST00000486536 OVOS1Q6IE37 1185 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 VHLLQ6RSH7 139 aa7.39□□□□□ -1.23
USP41-204ENST00000486536 KSR2Q6VAB6 950 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms