RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 WDHD1O75717 1129 aaPredicted RBP8.51□□□□□ -1.05
SMC4-217ENST00000485867 HOXD8P13378 290 aaPredicted RBP8.51□□□□□ -1.05
SMC4-217ENST00000485867 PSMC4P43686 418 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 VGLL4Q14135 290 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 LRIT3Q3SXY7 679 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 C16orf46Q6P387 395 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
SMC4-217ENST00000485867 COL26A1Q96A83 441 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 BSDC1Q9NW68 430 aaPredicted RBP8.51□□□□□ -1.05
SMC4-217ENST00000485867 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 MAPK8IP3Q9UPT6 1336 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 MMP20O60882 483 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 DEAF1O75398 565 aaPredicted RBP8.5□□□□□ -1.05
SMC4-217ENST00000485867 SGPL1O95470 568 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 EIF2AK2P19525 551 aaKnown RBP8.5□□□□□ -1.05
SMC4-217ENST00000485867 HOXD10P28358 340 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 CTSWP56202 376 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 UBXN2AP68543 259 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 FAM26DQ5JW98 314 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 C17orf99Q6UX52 265 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 CCDC191Q8NCU4 936 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMC4-217ENST00000485867 PRMT6Q96LA8 375 aaPredicted RBP8.5□□□□□ -1.05
SMC4-217ENST00000485867 DBF4Q9UBU7 674 aaPredicted RBP8.5□□□□□ -1.05
SMC4-217ENST00000485867 BIN2Q9UBW5 565 aaPredicted RBP8.5□□□□□ -1.05
SMC4-217ENST00000485867 LEMD3Q9Y2U8 911 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
SMC4-217ENST00000485867 NCOR1O75376 2440 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 F8W031 263 aaPredicted RBP8.49□□□□□ -1.05
SMC4-217ENST00000485867 PSAPP07602 524 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 HOXB7P09629 217 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 CETPP11597 493 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 SOX18P35713 384 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 TP53INP1Q96A56 240 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 PLD4Q96BZ4 506 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 TEPSINQ96N21 525 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 MYD88Q99836 296 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 CD209Q9NNX6 404 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 HYPKQ9NX55 129 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 CPA4Q9UI42 421 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 ZMYND8Q9ULU4 1186 aaPredicted RBP8.49□□□□□ -1.05
SMC4-217ENST00000485867 CSADQ9Y600 493 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 ADGRA2Q96PE1 1338 aa8.49□□□□□ -1.05
SMC4-217ENST00000485867 DDX60LQ5H9U9 1706 aaKnown RBP8.49□□□□□ -1.05
SMC4-217ENST00000485867 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.48□□□□□ -1.05
SMC4-217ENST00000485867 J3QW42 95 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 TNFRSF10BO14763 440 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 ATG7O95352 703 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 BRD2P25440 801 aaKnown RBP8.48□□□□□ -1.05
SMC4-217ENST00000485867 PRKCZQ05513 592 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 TNFAIP1Q13829 316 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
SMC4-217ENST00000485867 IGF2-ASQ6U949 168 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 CAPN12Q6ZSI9 719 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 C7orf61Q8IZ16 206 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 TDHQ8IZJ6 230 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 TTLL11Q8NHH1 800 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 GUCD1Q96NT3 240 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 NSUN5Q96P11 429 aaKnown RBP8.48□□□□□ -1.05
SMC4-217ENST00000485867 GREM2Q9H772 168 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 CWC25Q9NXE8 425 aaPredicted RBP8.48□□□□□ -1.05
SMC4-217ENST00000485867 CXXC1Q9P0U4 656 aaPredicted RBP8.48□□□□□ -1.05
SMC4-217ENST00000485867 SNCAIPQ9Y6H5 919 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 IRS2Q9Y4H2 1338 aa8.48□□□□□ -1.05
SMC4-217ENST00000485867 COL2A1P02458 1487 aaPredicted RBP8.47□□□□□ -1.05
SMC4-217ENST00000485867 CHL1O00533 1208 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 CAPN2P17655 700 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 NOS3P29474 1203 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 MAGEA10P43363 369 aaPredicted RBP8.47□□□□□ -1.05
SMC4-217ENST00000485867 RIPK4P57078 832 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 FKBP1AP62942 108 aaKnown RBP8.47□□□□□ -1.05
SMC4-217ENST00000485867 SNAPC2Q13487 334 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 ERO1BQ86YB8 467 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 DIS3LQ8TF46 1054 aaKnown RBP8.47□□□□□ -1.05
SMC4-217ENST00000485867 PAWRQ96IZ0 340 aaKnown RBP8.47□□□□□ -1.05
SMC4-217ENST00000485867 TMEM39BQ9GZU3 492 aa8.47□□□□□ -1.05
SMC4-217ENST00000485867 ZNF70Q9UC06 446 aaPredicted RBP8.47□□□□□ -1.05
SMC4-217ENST00000485867 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 TFRCP02786 760 aaKnown RBP8.46□□□□□ -1.06
SMC4-217ENST00000485867 SYN1P17600 705 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 RBM5P52756 815 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMC4-217ENST00000485867 LMOD3Q0VAK6 560 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 PPIL2Q13356 520 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 TMEM164Q5U3C3 297 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 DEFB118Q96PH6 123 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 ANKRD2Q9GZV1 360 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 PNNQ9H307 717 aaKnown RBP8.46□□□□□ -1.06
SMC4-217ENST00000485867 TDRD3Q9H7E2 651 aaKnown RBP8.46□□□□□ -1.06
SMC4-217ENST00000485867 PHAXQ9H814 394 aaKnown RBP8.46□□□□□ -1.06
SMC4-217ENST00000485867 PAK6Q9NQU5 681 aaPredicted RBP8.46□□□□□ -1.06
SMC4-217ENST00000485867 GABRQQ9UN88 632 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 PTPRFP10586 1907 aa8.46□□□□□ -1.06
SMC4-217ENST00000485867 EYSQ5T1H1 3165 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 PRUNE2Q8WUY3 3088 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 ADCY3O60266 1144 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 IL1R1P14778 569 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 IGHMBP2P38935 993 aaKnown RBP8.45□□□□□ -1.06
SMC4-217ENST00000485867 TMPOP42166 694 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms