RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 PRR12Q9ULL5 1215 aa5.35□□□□□ -1.55
SMARCC1-206ENST00000485737 LRP5O75197 1615 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ITIH6Q6UXX5 1313 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 KLF18A0A0U1RQI7 1052 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 FAM196BA6NMK8 535 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 TMEM232C9JQI7 657 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 H3BQF6 201 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 M0R2C6 588 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 GOLIM4O00461 696 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 BIN1O00499 593 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 DKK1O94907 266 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SERPINC1P01008 464 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 CHGBP05060 677 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 IVLP07476 585 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ZFYP08048 801 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 KCNA6P17658 529 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ANTXR2P58335 489 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ST5P78524 1137 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 GUCY1B3Q02153 619 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 IMMTQ16891 758 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 LONRF2Q1L5Z9 754 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 CFAP100Q494V2 611 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SPECC1LQ69YQ0 1117 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 CTR9Q6PD62 1173 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ZNF790Q6PG37 636 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SHC4Q6S5L8 630 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SYNE3Q6ZMZ3 975 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ATG9AQ7Z3C6 839 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SRGAP1Q7Z6B7 1085 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SRLQ86TD4 932 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 METTL16Q86W50 562 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ANKMY2Q8IV38 441 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 CEP112Q8N8E3 955 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 TC2NQ8N9U0 490 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 MLKLQ8NB16 471 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 EDARADDQ8WWZ3 215 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 HSH2DQ96JZ2 352 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 PANX2Q96RD6 677 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 WDR24Q96S15 920 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 NAA15Q9BXJ9 866 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 PARD6BQ9BYG5 372 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 RASSF4Q9H2L5 321 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 SLC52A2Q9HAB3 445 aa5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 NAP1L2Q9ULW6 460 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-206ENST00000485737 FER1L4A9Z1Z3 1794 aa5.34□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.56
SMARCC1-206ENST00000485737 MEGF6O75095 1541 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 CNTNAP5Q8WYK1 1306 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 A0A0G2JLW4 131 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 SHISA8B8ZZ34 492 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 MYO1CO00159 1063 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 NPHP1O15259 732 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 POLR3GO15318 223 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 PRC1O43663 620 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 C21orf2O43822 256 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 ERLIN1O75477 346 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 EIF3JO75822 258 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 CCDC175P0C221 793 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 FAM157BP0CG42 384 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 ERCC5P28715 1186 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 ACTN2P35609 894 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 PBX1P40424 430 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 SARSP49591 514 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 CHMP4BP1P59074 171 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 GNG11P61952 73 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 FOXO4P98177 505 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 MORC3Q14149 939 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 WHAMMP3Q1A5X7 153 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 BEND6Q5SZJ8 279 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 C1orf229Q6ZS94 237 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 COPS6Q7L5N1 327 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 UBE3BQ7Z3V4 1068 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 VPS37DQ86XT2 251 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 CCDC191Q8NCU4 936 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 PLBD2Q8NHP8 589 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 NCOA7Q8NI08 942 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 LRRC59Q96AG4 307 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 DHX58Q96C10 678 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 CCDC51Q96ER9 411 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 UTP14AQ9BVJ6 771 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 GBP3Q9H0R5 595 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 YY1AP1Q9H869 796 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 ANKZF1Q9H8Y5 726 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 STRN4Q9NRL3 753 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 RAI14Q9P0K7 980 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 MARK1Q9P0L2 795 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 MYO1AQ9UBC5 1043 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 HOOK1Q9UJC3 728 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 CDC23Q9UJX2 597 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 UBR2Q8IWV8 1755 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 ADAMTSL3P82987 1691 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 ALS2Q96Q42 1657 aa5.33□□□□□ -1.56
SMARCC1-206ENST00000485737 RIC1Q4ADV7 1423 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 EYA2O00167 538 aa5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 SH2B2O14492 632 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-206ENST00000485737 CPLX1O14810 134 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms