RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 EFR3BQ9Y2G0 817 aa5.82□□□□□ -1.48
VPS50-217ENST00000485140 L1CAMP32004 1257 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 TRIM26Q12899 539 aaPredicted RBP5.81□□□□□ -1.48
VPS50-217ENST00000485140 NCAPHQ15003 741 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 DCAF15Q66K64 600 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 METTL16Q86W50 562 aaKnown RBP5.81□□□□□ -1.48
VPS50-217ENST00000485140 NT5DC4Q86YG4 428 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 MRRFQ96E11 262 aaKnown RBP5.81□□□□□ -1.48
VPS50-217ENST00000485140 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 CCSER2Q9H7U1 834 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 PCDH18Q9HCL0 1135 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 IMPACTQ9P2X3 320 aa5.81□□□□□ -1.48
VPS50-217ENST00000485140 ANKRD34BA5PLL1 514 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 H0Y8X5 98 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 IRS4O14654 1257 aaPredicted RBP5.8□□□□□ -1.48
VPS50-217ENST00000485140 TP53P04637 393 aaPredicted RBP5.8□□□□□ -1.48
VPS50-217ENST00000485140 SEPHS1P49903 392 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 AMPD2Q01433 879 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 SLC9A5Q14940 896 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 TNNI3KQ59H18 835 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 TDRD10Q5VZ19 366 aaKnown RBP5.8□□□□□ -1.48
VPS50-217ENST00000485140 LILRA6Q6PI73 481 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 ADAT2Q7Z6V5 191 aaKnown RBP5.8□□□□□ -1.48
VPS50-217ENST00000485140 PPFIBP1Q86W92 1011 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 KLHL25Q9H0H3 589 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 NOL6Q9H6R4 1146 aaKnown RBP5.8□□□□□ -1.48
VPS50-217ENST00000485140 CNTD2Q9H8S5 307 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 KLHL14Q9P2G3 628 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 ZNF451Q9Y4E5 1061 aa5.8□□□□□ -1.48
VPS50-217ENST00000485140 CD3EP07766 207 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 AFF3P51826 1226 aaKnown RBP5.79□□□□□ -1.48
VPS50-217ENST00000485140 ZPBP2Q6X784 338 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 TMC6Q7Z403 805 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 NETO2Q8NC67 525 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 PEX11GQ96HA9 241 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 JMJD8Q96S16 334 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 ZCCHC4Q9H5U6 513 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 PARD6AQ9NPB6 346 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 INPP5FQ9Y2H2 1132 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 BACE2Q9Y5Z0 518 aa5.79□□□□□ -1.48
VPS50-217ENST00000485140 A0A1W2PQH9 124 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 FAM86C2PA6NEL3 165 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 AURKAO14965 403 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 ZBTB7AO95365 584 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 NASPP49321 788 aaPredicted RBP5.78□□□□□ -1.48
VPS50-217ENST00000485140 PLEKHN1Q494U1 663 aaPredicted RBP5.78□□□□□ -1.48
VPS50-217ENST00000485140 BICRALQ6AI39 1079 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 CNKSR3Q6P9H4 555 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 LDHDQ86WU2 507 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 ARHGEF39Q8N4T4 335 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 BRF1Q92994 677 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 ZDHHC15Q96MV8 337 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 FCRL3Q96P31 734 aaPredicted RBP5.78□□□□□ -1.48
VPS50-217ENST00000485140 APBA2Q99767 749 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 CAPN10Q9HC96 672 aa5.78□□□□□ -1.48
VPS50-217ENST00000485140 DBR1Q9UK59 544 aaKnown RBP5.78□□□□□ -1.48
VPS50-217ENST00000485140 NUDT19A8MXV4 375 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 NOP56O00567 594 aaKnown RBP5.77□□□□□ -1.49
VPS50-217ENST00000485140 CBFA2T2O43439 604 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 INHBBP09529 407 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 PAMP19021 973 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 PI3P19957 117 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 CTSWP56202 376 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 HDLBPQ00341 1268 aaKnown RBP5.77□□□□□ -1.49
VPS50-217ENST00000485140 MVKQ03426 396 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 ZYXQ15942 572 aaKnown RBP5.77□□□□□ -1.49
VPS50-217ENST00000485140 IQCEQ6IPM2 695 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 RPTNQ6XPR3 784 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 TMEM52Q8NDY8 209 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 DACT3Q96B18 629 aaPredicted RBP5.77□□□□□ -1.49
VPS50-217ENST00000485140 KCNK12Q9HB15 430 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 LUC7LQ9NQ29 371 aaKnown RBP5.77□□□□□ -1.49
VPS50-217ENST00000485140 MINPP1Q9UNW1 487 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 SUGT1Q9Y2Z0 365 aa5.77□□□□□ -1.49
VPS50-217ENST00000485140 IRS2Q9Y4H2 1338 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 DBHP09172 617 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 CDR1P51861 262 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 PPP2R5EQ16537 467 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 RUFY4Q6ZNE9 571 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 LZTR1Q8N653 840 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 SGPP1Q9BX95 441 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 CGGBP1Q9UFW8 167 aaPredicted RBP5.76□□□□□ -1.49
VPS50-217ENST00000485140 FAN1Q9Y2M0 1017 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 CCDC9Q9Y3X0 531 aaKnown RBP5.76□□□□□ -1.49
VPS50-217ENST00000485140 PCDHA5Q9Y5H7 936 aa5.76□□□□□ -1.49
VPS50-217ENST00000485140 LTBP3Q9NS15 1303 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 NPHP3-ACAD11A0A0J9YXS1 232 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 C2orf71A6NGG8 1288 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 NPHS1O60500 1241 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 EPHX1P07099 455 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 NCAM1P13591 858 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 GALK1P51570 392 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 SSPNQ14714 243 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 VHLLQ6RSH7 139 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 CCDC81Q6ZN84 652 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 FAM129CQ86XR2 697 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 LINC01356Q8N9X3 169 aa5.75□□□□□ -1.49
VPS50-217ENST00000485140 MARCH10Q8NA82 808 aaPredicted RBP5.75□□□□□ -1.49
VPS50-217ENST00000485140 TSPAN17Q96FV3 270 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms