RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 JAG2Q9Y219 1238 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 IVNS1ABPQ9Y6Y0 642 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 OTOFQ9HC10 1997 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 SNAP23O00161 211 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 APAF1O14727 1248 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 CYP2E1P05181 493 aaPredicted RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 PDIA4P13667 645 aaKnown RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 CES1P23141 567 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 FXR1P51114 621 aaKnown RBP eCLIP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 SP3Q02447 781 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 SLC9C1Q4G0N8 1177 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 PRRT3Q5FWE3 981 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 NBPF12Q5TAG4 269 aaPredicted RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 TSPYL6Q8N831 410 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 PLD4Q96BZ4 506 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 ARMC5Q96C12 935 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 CHMP4AQ9BY43 222 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 A0A1B0GUL6 1792 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 SOWAHDA6NJG2 315 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 TAF5LO75529 589 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 COL8A1P27658 744 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 GSK3AP49840 483 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 AFF1P51825 1210 aaKnown RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 CAP1Q01518 475 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 KCNA1Q09470 495 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 SLC4A8Q2Y0W8 1093 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 GDF6Q6KF10 455 aaPredicted RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 ZNF804AQ7Z570 1209 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 ANKRD13AQ8IZ07 590 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 C1orf127Q8N9H9 656 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 TSR2Q969E8 191 aaKnown RBP7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 OPTNQ96CV9 577 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 PTPN18Q99952 460 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 TRAIPQ9BWF2 469 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 PRDM6Q9NQX0 595 aa7.62□□□□□ -1.19
SEMA3D-204ENST00000484038 AOX1Q06278 1338 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 ANKRD18BA2A2Z9 1011 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 UNCXA6NJT0 531 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 PHACTR2O75167 634 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 USP2O75604 605 aaPredicted RBP7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 NID1P14543 1247 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 GCKRQ14397 625 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 RASA3Q14644 834 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 NBPF11Q86T75 865 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 SNX29Q8TEQ0 813 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 ZNF333Q96JL9 665 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 PRMT6Q96LA8 375 aaPredicted RBP7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 GNEQ9Y223 722 aaKnown RBP7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 PTCH2Q9Y6C5 1203 aa7.61□□□□□ -1.19
SEMA3D-204ENST00000484038 PLIN1O60240 522 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 HOXD8P13378 290 aaPredicted RBP7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 ARHGAP4P98171 946 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 IFIT5Q13325 482 aaKnown RBP7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 TNFAIP1Q13829 316 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 ARHGEF6Q15052 776 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 TAF1CQ15572 869 aaPredicted RBP7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 XKR5Q6UX68 686 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 G2E3Q7L622 706 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 ALYREFQ86V81 257 aaKnown RBP7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 DMRTC2Q8IXT2 367 aaPredicted RBP7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 GJD3Q8N144 294 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 KCTD17Q8N5Z5 321 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 PLA2G12BQ9BX93 195 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 MYH16Q9H6N6 1097 aa7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 FOXD3Q9UJU5 478 aaPredicted RBP7.6□□□□□ -1.19
SEMA3D-204ENST00000484038 IRS2Q9Y4H2 1338 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 ZSWIM8A7E2V4 1837 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 CCL15-CCL14A0A0B4J2E2 113 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 TNFRSF21O75509 655 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 SMNDC1O75940 238 aaKnown RBP eCLIP7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 CSF1RP07333 972 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 IL1R1P14778 569 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 CASP7P55210 303 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 ATP11AP98196 1134 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 VGLL4Q14135 290 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 CCL15Q16663 113 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 TWISTNBQ3B726 338 aaPredicted RBP7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 TAF7LQ5H9L4 462 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 CEP135Q66GS9 1140 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 WFDC8Q8IUA0 241 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 SH3TC2Q8TF17 1288 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 BRI3BPQ8WY22 251 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 TDRD3Q9H7E2 651 aaKnown RBP7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 ZFYVE28Q9HCC9 887 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 CSADQ9Y600 493 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 ARAP2Q8WZ64 1704 aa7.59□□□□□ -1.19
SEMA3D-204ENST00000484038 TCP10L2B9ZVM9 353 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 H0YGN5 161 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 GTF2A2P52657 109 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 FKBP1AP62942 108 aaKnown RBP7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 RAC1P63000 192 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 COL9A3Q14050 684 aaPredicted RBP7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 MFSD14BQ5SR56 506 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 C15orf52Q6ZUT6 534 aaKnown RBP7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 FAM43AQ8N2R8 423 aa7.58□□□□□ -1.2
SEMA3D-204ENST00000484038 DNAAF4Q8WXU2 420 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms