RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SH3RF1Q7Z6J0 888 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 ERCC4Q92889 916 aaPredicted RBP15.96■□□□□ 0.15
CLK3-204ENST00000483723 DNAJC25Q9H1X3 360 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 RANBP17Q9H2T7 1088 aaKnown RBP15.96■□□□□ 0.15
CLK3-204ENST00000483723 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
CLK3-204ENST00000483723 MEIS2O14770 477 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 ZNF165P49910 485 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 NLRP12P59046 1061 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 LETM2Q2VYF4 491 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 PPP4R3AQ6IN85 833 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 PYM1Q9BRP8 204 aaKnown RBP15.95■□□□□ 0.14
CLK3-204ENST00000483723 WDR18Q9BV38 432 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 FEM1BQ9UK73 627 aa15.95■□□□□ 0.14
CLK3-204ENST00000483723 MYH7BA7E2Y1 1941 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 CCNT1O60563 726 aaKnown RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 OR52Z1P0C646 297 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 SLFN14P0C7P3 912 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 INPP5BP32019 993 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 SARSP49591 514 aaKnown RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 E2F4Q16254 413 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 UBE2SQ16763 222 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 NT5DC1Q5TFE4 455 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 CCDC84Q86UT8 332 aaPredicted RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 LPAR1Q92633 364 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 MTMR9Q96QG7 549 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 CCSER1Q9C0I3 900 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 ADARB2Q9NS39 739 aaKnown RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 GGA3Q9NZ52 723 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 HOOK1Q9UJC3 728 aaKnown RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 SNAP25P60880 206 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 IKQ13123 557 aaPredicted RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 AP3B2Q13367 1082 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 C9orf131Q5VYM1 1079 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 C11orf57Q6ZUT1 292 aaPredicted RBP15.94■□□□□ 0.14
CLK3-204ENST00000483723 SCYL3Q8IZE3 742 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 SPATA20Q8TB22 786 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 CRYGNQ8WXF5 182 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 PCDHA5Q9Y5H7 936 aa15.94■□□□□ 0.14
CLK3-204ENST00000483723 PIK3CDO00329 1044 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 OPLAHO14841 1288 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 WDR46O15213 610 aaKnown RBP15.93■□□□□ 0.14
CLK3-204ENST00000483723 NEMFO60524 1076 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 USP11P51784 963 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 PNOCQ13519 176 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 POSTNQ15063 836 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 LUZP1Q86V48 1076 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 PDILTQ8N807 584 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 AK8Q96MA6 479 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 NAP1L4Q99733 375 aaKnown RBP15.93■□□□□ 0.14
CLK3-204ENST00000483723 BPIFA3Q9BQP9 254 aa15.93■□□□□ 0.14
CLK3-204ENST00000483723 CYP3A7-CYP3A51PA0A087WV96 503 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L15C9J2P7 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L13C9JLJ4 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L11C9JVI0 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L18D6R9N7 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L22D6RA61 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L17D6RBQ6 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L19D6RCP7 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L20D6RJB6 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 FOXN1O15353 648 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 GCFC2P16383 781 aaKnown RBP15.92■□□□□ 0.14
CLK3-204ENST00000483723 CYP3A7P24462 503 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L24Q0WX57 530 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 USP17L6PQ6QN14 398 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 DHX58Q96C10 678 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 KLRG1Q96E93 195 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 MBOAT7Q96N66 472 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 SMCHD1A6NHR9 2005 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
CLK3-204ENST00000483723 PHIPQ8WWQ0 1821 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 FOSP01100 380 aaPredicted RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 LMOD1P29536 600 aaPredicted RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 ZYXQ15942 572 aaKnown RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 SUPT20HL1Q3ZLR7 823 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 NOL9Q5SY16 702 aaKnown RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 PRAMEF18Q5VWM3 479 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 MOXD1Q6UVY6 613 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 PAGE5Q96GU1 130 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 P2RX7Q99572 595 aaKnown RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 FEZ1Q99689 392 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 ANO3Q9BYT9 981 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 A0A087WWV3 80 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 AP5Z1O43299 807 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 TDP2O95551 362 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 PTPRAP18433 802 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 DPCR1Q3MIW9 517 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 PDXDC2PQ6P474 469 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 CEP57L1Q8IYX8 460 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 IGSF22Q8N9C0 903 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 NAT10Q9H0A0 1025 aaKnown RBP15.91■□□□□ 0.14
CLK3-204ENST00000483723 EMILIN3Q9NT22 766 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 FBXO28Q9NVF7 368 aa15.91■□□□□ 0.14
CLK3-204ENST00000483723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.9■□□□□ 0.14
CLK3-204ENST00000483723 SLC37A4O43826 429 aa15.9■□□□□ 0.14
CLK3-204ENST00000483723 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms