RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 DTNBO60941 627 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 EXOC8Q8IYI6 725 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 NELFBQ8WX92 580 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 ZNF577Q9BSK1 485 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 NMT2O60551 498 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 ABCD1P33897 745 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 PNOCQ13519 176 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 HSP90B2PQ58FF3 399 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 F5H6K3 240 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 NDUFA8P51970 172 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 KLRC3Q07444 240 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 ATP6V0A1Q93050 837 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 RIC1Q4ADV7 1423 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 GSDMAQ96QA5 445 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 PSMD1Q99460 953 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 RIOK1Q9BRS2 568 aaKnown RBP21.47■■□□□ 1.03
CCM2-214ENST00000481194 MRPL44Q9H9J2 332 aaKnown RBP21.47■■□□□ 1.03
CCM2-214ENST00000481194 IMPACTQ9P2X3 320 aa21.47■■□□□ 1.03
CCM2-214ENST00000481194 CDC27P30260 824 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 NR5A1Q13285 461 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 CCDC186Q7Z3E2 898 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 ZNF579Q8NAF0 562 aaKnown RBP21.46■■□□□ 1.03
CCM2-214ENST00000481194 NRBP2Q9NSY0 501 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 COL4A3BPQ9Y5P4 624 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 GMPSP49915 693 aaPredicted RBP21.46■■□□□ 1.03
CCM2-214ENST00000481194 DYMQ7RTS9 669 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 EHD4Q9H223 541 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 KIF4AO95239 1232 aa21.46■■□□□ 1.03
CCM2-214ENST00000481194 LUC7L2Q9Y383 392 aaKnown RBP21.46■■□□□ 1.03
CCM2-214ENST00000481194 ONECUT3O60422 494 aaPredicted RBP21.45■■□□□ 1.02
CCM2-214ENST00000481194 RASA1P20936 1047 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 RBSNQ9H1K0 784 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 ZHX2Q9Y6X8 837 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 SKILP12757 684 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 RBM46Q8TBY0 533 aaKnown RBP21.45■■□□□ 1.02
CCM2-214ENST00000481194 CLIC6Q96NY7 704 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 TTC12Q9H892 705 aaPredicted RBP21.45■■□□□ 1.02
CCM2-214ENST00000481194 POTEB2H3BUK9 544 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 RASA3Q14644 834 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 RASGRP4Q8TDF6 673 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 C19orf81C9J6K1 198 aa21.45■■□□□ 1.02
CCM2-214ENST00000481194 SNW1Q13573 536 aaKnown RBP21.45■■□□□ 1.02
CCM2-214ENST00000481194 RTFDC1Q9BY42 306 aaPredicted RBP21.45■■□□□ 1.02
CCM2-214ENST00000481194 NHSL1Q5SYE7 1610 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 ANKRD62A6NC57 917 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 MYOCDQ8IZQ8 938 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 PRPF38AQ8NAV1 312 aaKnown RBP21.44■■□□□ 1.02
CCM2-214ENST00000481194 GAP43P17677 238 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 GPT2Q8TD30 523 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 FNBP1Q96RU3 617 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 JPH2Q9BR39 696 aaPredicted RBP21.44■■□□□ 1.02
CCM2-214ENST00000481194 GCNT3O95395 438 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 FANCCQ00597 558 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 TCRBV5S4A2TA0A5A2 114 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 RPN1P04843 607 aaKnown RBP21.44■■□□□ 1.02
CCM2-214ENST00000481194 ENOX2Q16206 610 aaKnown RBP21.44■■□□□ 1.02
CCM2-214ENST00000481194 HSP90AA4PQ58FG1 418 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 GLG1Q92896 1179 aa21.44■■□□□ 1.02
CCM2-214ENST00000481194 WDR46O15213 610 aaKnown RBP21.43■■□□□ 1.02
CCM2-214ENST00000481194 CEP135Q66GS9 1140 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 MIS18BP1Q6P0N0 1132 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 MCM3P25205 808 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 BLZF1Q9H2G9 400 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 TEX35Q5T0J7 233 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 LARP4BQ92615 738 aaKnown RBP21.43■■□□□ 1.02
CCM2-214ENST00000481194 PANK4Q9NVE7 773 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 NFE2L3Q9Y4A8 694 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 PPP2R3BQ9Y5P8 575 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 IBSPP21815 317 aaPredicted RBP21.43■■□□□ 1.02
CCM2-214ENST00000481194 PRPHP41219 470 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 FASTKD5Q7L8L6 764 aaKnown RBP21.43■■□□□ 1.02
CCM2-214ENST00000481194 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
CCM2-214ENST00000481194 AKR1B15C9JRZ8 316 aaPredicted RBP21.42■■□□□ 1.02
CCM2-214ENST00000481194 SLFN14P0C7P3 912 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 LRP6O75581 1613 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 CCDC175P0C221 793 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 TNNT1P13805 278 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 PAFAH1B1P43034 410 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 TBC1D8BQ0IIM8 1120 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 CRY2Q49AN0 593 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 RNF207Q6ZRF8 634 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 SSR1P43307 286 aaKnown RBP21.42■■□□□ 1.02
CCM2-214ENST00000481194 ANTXR2P58335 489 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 ZNF543Q08ER8 600 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 AIFM3Q96NN9 605 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 CLEC17AQ6ZS10 378 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 RIC8AQ9NPQ8 531 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 DCAF17Q5H9S7 520 aaPredicted RBP21.42■■□□□ 1.02
CCM2-214ENST00000481194 WDR44Q5JSH3 913 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 NACC1Q96RE7 527 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 MAP7D2Q96T17 732 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 ARID3AQ99856 593 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 GBP3Q9H0R5 595 aa21.42■■□□□ 1.02
CCM2-214ENST00000481194 LARSQ9P2J5 1176 aaKnown RBP21.42■■□□□ 1.02
CCM2-214ENST00000481194 USP17L15C9J2P7 530 aa21.41■■□□□ 1.02
CCM2-214ENST00000481194 USP17L13C9JLJ4 530 aa21.41■■□□□ 1.02
CCM2-214ENST00000481194 USP17L11C9JVI0 530 aa21.41■■□□□ 1.02
CCM2-214ENST00000481194 USP17L18D6R9N7 530 aa21.41■■□□□ 1.02
CCM2-214ENST00000481194 USP17L22D6RA61 530 aa21.41■■□□□ 1.02
CCM2-214ENST00000481194 USP17L17D6RBQ6 530 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms