RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 AGXT2Q9BYV1 514 aa23.64■■□□□ 1.37
CTSA-206ENST00000480961 ZBTB5O15062 677 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 HOXC6P09630 235 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 GNAQP50148 359 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 NSMFQ6X4W1 530 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 TMTC3Q6ZXV5 915 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 FBXL16Q8N461 479 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 CLEC4DQ8WXI8 215 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 C22orf23Q9BZE7 217 aa23.63■■□□□ 1.37
CTSA-206ENST00000480961 A1CFQ9NQ94 594 aaKnown RBP23.63■■□□□ 1.37
CTSA-206ENST00000480961 DOCK3Q8IZD9 2030 aa23.62■■□□□ 1.37
CTSA-206ENST00000480961 CDC27P30260 824 aa23.62■■□□□ 1.37
CTSA-206ENST00000480961 ADD1P35611 737 aaKnown RBP23.62■■□□□ 1.37
CTSA-206ENST00000480961 METAP2P50579 478 aaKnown RBP eCLIP23.62■■□□□ 1.37
CTSA-206ENST00000480961 CNTN2Q02246 1040 aa23.62■■□□□ 1.37
CTSA-206ENST00000480961 ZNF792Q3KQV3 632 aa23.62■■□□□ 1.37
CTSA-206ENST00000480961 PURBQ96QR8 312 aaKnown RBP23.62■■□□□ 1.37
CTSA-206ENST00000480961 LZTS2Q9BRK4 669 aa23.62■■□□□ 1.37
CTSA-206ENST00000480961 FAM217BQ9NTX9 383 aaPredicted RBP23.62■■□□□ 1.37
CTSA-206ENST00000480961 HMGCRP04035 888 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 CYP2C19P33261 490 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 TBC1D5Q92609 795 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 IL17RAQ96F46 866 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 MAML3Q96JK9 1138 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 SPZ1Q9BXG8 430 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 AMNQ9BXJ7 453 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 SLC5A4Q9NY91 659 aa23.61■■□□□ 1.37
CTSA-206ENST00000480961 DNAJC25-GNG10A0A024R161 153 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 PNMA6FA0A0J9YX94 578 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 POTEB2H3BUK9 544 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 PDIA3P30101 505 aaKnown RBP23.6■■□□□ 1.37
CTSA-206ENST00000480961 CCT2P78371 535 aaKnown RBP23.6■■□□□ 1.37
CTSA-206ENST00000480961 BAATQ14032 418 aaPredicted RBP23.6■■□□□ 1.37
CTSA-206ENST00000480961 RRP36Q96EU6 259 aaKnown RBP23.6■■□□□ 1.37
CTSA-206ENST00000480961 UNC93B1Q9H1C4 597 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 RBM28Q9NW13 759 aaKnown RBP23.6■■□□□ 1.37
CTSA-206ENST00000480961 CYP39A1Q9NYL5 469 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 PCDHA1Q9Y5I3 950 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 PLXNB2O15031 1838 aa23.6■■□□□ 1.37
CTSA-206ENST00000480961 PTPDC1A2A3K4 754 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 CCL5P13501 91 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 NEK4P51957 841 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 UBXN2AP68543 259 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 STK3Q13188 491 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 NOL8Q76FK4 1167 aaKnown RBP23.59■■□□□ 1.37
CTSA-206ENST00000480961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.59■■□□□ 1.37
CTSA-206ENST00000480961 TRMT44Q8IYL2 757 aaKnown RBP23.59■■□□□ 1.37
CTSA-206ENST00000480961 NCOA5Q9HCD5 579 aaKnown RBP23.59■■□□□ 1.37
CTSA-206ENST00000480961 PNMA2Q9UL42 364 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 ABCB11O95342 1321 aa23.59■■□□□ 1.37
CTSA-206ENST00000480961 PPFIA3O75145 1194 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 PRKAR2AP13861 404 aaKnown RBP23.58■■□□□ 1.37
CTSA-206ENST00000480961 CALML3P27482 149 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 SMARCA1P28370 1054 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 AK2P54819 239 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 SOX10P56693 466 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 EVCP57679 992 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 CACNB2Q08289 660 aaPredicted RBP23.58■■□□□ 1.37
CTSA-206ENST00000480961 PRAMEF19Q5SWL8 479 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 MFSD14CQ5VZR4 134 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 SLC30A10Q6XR72 485 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 FGD4Q96M96 766 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 KIF2CQ99661 725 aa23.58■■□□□ 1.37
CTSA-206ENST00000480961 DDX49Q9Y6V7 483 aaKnown RBP23.58■■□□□ 1.37
CTSA-206ENST00000480961 SOWAHBA6NEL2 793 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 FUT2Q10981 343 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 RNF207Q6ZRF8 634 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 FAM133AQ8N9E0 248 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 BACH2Q9BYV9 841 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 RNF208Q9H0X6 261 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 UPF2Q9HAU5 1272 aaKnown RBP23.57■■□□□ 1.36
CTSA-206ENST00000480961 MRPL11Q9Y3B7 192 aaKnown RBP23.57■■□□□ 1.36
CTSA-206ENST00000480961 V9GY48 417 aaPredicted RBP23.57■■□□□ 1.36
CTSA-206ENST00000480961 PFASO15067 1338 aa23.57■■□□□ 1.36
CTSA-206ENST00000480961 RCAN1P53805 252 aa23.56■■□□□ 1.36
CTSA-206ENST00000480961 OLFML2BQ68BL8 750 aa23.56■■□□□ 1.36
CTSA-206ENST00000480961 SEC63Q9UGP8 760 aaKnown RBP23.56■■□□□ 1.36
CTSA-206ENST00000480961 TPCN1Q9ULQ1 816 aa23.56■■□□□ 1.36
CTSA-206ENST00000480961 OPLAHO14841 1288 aa23.55■■□□□ 1.36
CTSA-206ENST00000480961 IGHA2P01877 340 aa23.55■■□□□ 1.36
CTSA-206ENST00000480961 CCND3P30281 292 aaPredicted RBP23.55■■□□□ 1.36
CTSA-206ENST00000480961 RBM25P49756 843 aaKnown RBP23.55■■□□□ 1.36
CTSA-206ENST00000480961 RPS6P62753 249 aaKnown RBP23.55■■□□□ 1.36
CTSA-206ENST00000480961 TRPV1Q8NER1 839 aa23.55■■□□□ 1.36
CTSA-206ENST00000480961 TINF2Q9BSI4 451 aa23.55■■□□□ 1.36
CTSA-206ENST00000480961 ALDH8A1Q9H2A2 487 aaPredicted RBP23.55■■□□□ 1.36
CTSA-206ENST00000480961 DIS3Q9Y2L1 958 aaKnown RBP23.55■■□□□ 1.36
CTSA-206ENST00000480961 CNTNAP5Q8WYK1 1306 aa23.55■■□□□ 1.36
CTSA-206ENST00000480961 CCDC196A0A1B0GTZ2 297 aa23.54■■□□□ 1.36
CTSA-206ENST00000480961 POTEFA5A3E0 1075 aa23.54■■□□□ 1.36
CTSA-206ENST00000480961 MAP3K21Q5TCX8 1036 aa23.54■■□□□ 1.36
CTSA-206ENST00000480961 ZNF274Q96GC6 653 aaPredicted RBP23.54■■□□□ 1.36
CTSA-206ENST00000480961 BRCA2P51587 3418 aa23.54■■□□□ 1.36
CTSA-206ENST00000480961 ASTN1O14525 1302 aa23.54■■□□□ 1.36
CTSA-206ENST00000480961 DTNBO60941 627 aa23.53■■□□□ 1.36
CTSA-206ENST00000480961 CFBP00751 764 aa23.53■■□□□ 1.36
CTSA-206ENST00000480961 HEATR3Q7Z4Q2 680 aa23.53■■□□□ 1.36
CTSA-206ENST00000480961 GPKOWQ92917 476 aaPredicted RBP eCLIP23.53■■□□□ 1.36
CTSA-206ENST00000480961 PHKBQ93100 1093 aa23.53■■□□□ 1.36
CTSA-206ENST00000480961 TMEM106CQ9BVX2 250 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms