RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 PPP1R37O75864 691 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 HDLBPQ00341 1268 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 PAPD7Q5XG87 772 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 IQCEQ6IPM2 695 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 CCDC129Q6ZRS4 1044 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 ATG9AQ7Z3C6 839 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 MYCBPAPQ8TBZ2 947 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 PARD3BQ8TEW8 1205 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 BORCS6Q96GS4 357 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 SLF1Q9BQI6 1058 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 HOMER3Q9NSC5 361 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 EYA2O00167 538 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 SASH1O94885 1247 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 IPO7O95373 1038 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 ATP5JP18859 108 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 FXR1P51114 621 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHD6-208ENST00000480022 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 NNTQ13423 1086 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 SPTY2D1Q68D10 685 aaPredicted RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 ELOA2Q8IYF1 753 aaPredicted RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 RNPC3Q96LT9 517 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 NUCKS1Q9H1E3 243 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 CNNM1Q9NRU3 951 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 RIPOR2Q9Y4F9 1068 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 LRP5O75197 1615 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 FOXN1O15353 648 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 CIAO1O76071 339 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 FAM107AO95990 144 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 GYPCP04921 128 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■□□□ 13.5
CHD6-208ENST00000480022 FILIP1LQ4L180 1135 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 ZC3H12AQ5D1E8 599 aaKnown RBP12.1□□□□□ -0.47
CHD6-208ENST00000480022 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 TTLL6Q8N841 843 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 RUBCNQ92622 972 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 IRAK4Q9NWZ3 460 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 MYH8P13535 1937 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 PECAM1P16284 738 aaPredicted RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 RASSF8Q8NHQ8 419 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 ZBTB10Q96DT7 871 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 MED15Q96RN5 788 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 ADD3Q9UEY8 706 aaKnown RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 SRRM3A6NNA2 597 aaPredicted RBP12.09□□□□□ -0.47
CHD6-208ENST00000480022 PLCD1P51178 756 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 EPHB4P54760 987 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 MORC3Q14149 939 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 KCNB1Q14721 858 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 POSTNQ15063 836 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 JAKMIP2Q96AA8 810 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 HAUS4Q9H6D7 363 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 MINPP1Q9UNW1 487 aa12.09□□□□□ -0.47
CHD6-208ENST00000480022 ITIH6Q6UXX5 1313 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
CHD6-208ENST00000480022 RPS6KA3P51812 740 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 SEC24CP53992 1094 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 EMC10Q5UCC4 262 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 KCTD16Q68DU8 428 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 TRIML1Q8N9V2 468 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
CHD6-208ENST00000480022 ABHD10Q9NUJ1 306 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
CHD6-208ENST00000480022 ATP6V0A2Q9Y487 856 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 ZNF609O15014 1411 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 IL15P40933 162 aaPredicted RBP12.08□□□□□ -0.48
CHD6-208ENST00000480022 C2orf54Q08AI8 447 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 PTPAQ15257 358 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 EMBQ6PCB8 327 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 OR8K1Q8NGG5 319 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 C7orf43Q8WVR3 580 aa12.08□□□□□ -0.48
CHD6-208ENST00000480022 MGRN1O60291 552 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 CHRNDQ07001 517 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 THOC1Q96FV9 657 aaKnown RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 GJB4Q9NTQ9 266 aa12.07□□□□□ -0.48
CHD6-208ENST00000480022 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
CHD6-208ENST00000480022 MROH5Q6ZUA9 1318 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms