RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 CUL4AQ13619 759 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 Q3C1V9 767 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
CD46-214ENST00000480003 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 ATG4CQ96DT6 458 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 TANGO6Q9C0B7 1094 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 SLC38A10Q9HBR0 1119 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
CD46-214ENST00000480003 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
CD46-214ENST00000480003 CNMDO75829 334 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 ALDH1A1P00352 501 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 CYP2C8P10632 490 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 HERVK_113P62684 666 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
CD46-214ENST00000480003 C17orf99Q6UX52 265 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
CD46-214ENST00000480003 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 VAT1LQ9HCJ6 419 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
CD46-214ENST00000480003 V9GY48 417 aaPredicted RBP11.13□□□□□ -0.63
CD46-214ENST00000480003 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
CD46-214ENST00000480003 ZNF536O15090 1300 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 ADGRA2Q96PE1 1338 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 TLR2O60603 784 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 BCRP11274 1271 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 FDPSP14324 419 aaKnown RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 GCLCP48506 637 aaPredicted RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 TMEM132BQ14DG7 1078 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 PKN1Q16512 942 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 MB21D1Q8N884 522 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 GTF3C2Q8WUA4 911 aaPredicted RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 LLPHQ9BRT6 129 aaKnown RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 ZFYVE28Q9HCC9 887 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 TXNRD2Q9NNW7 524 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 BTBD7Q9P203 1132 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 MORF4L1Q9UBU8 362 aa11.12□□□□□ -0.63
CD46-214ENST00000480003 RBM19Q9Y4C8 960 aaKnown RBP11.12□□□□□ -0.63
CD46-214ENST00000480003 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 RLFQ13129 1914 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 ZBTB5O15062 677 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 PEX10O60683 326 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 ZBED4O75132 1171 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 OAZ1P54368 228 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 SNAP25P60880 206 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 MAP2K1Q02750 393 aaPredicted RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 IKQ13123 557 aaPredicted RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 CRHR2Q13324 411 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 QRICH1Q2TAL8 776 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 PIGSQ96S52 555 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 ZNF214Q9UL59 606 aaPredicted RBP11.11□□□□□ -0.63
CD46-214ENST00000480003 LOC285556D6RIA3 1793 aa11.11□□□□□ -0.63
CD46-214ENST00000480003 TK2O00142 265 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 CPLX1O14810 134 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 PPP1R11O60927 126 aaPredicted RBP11.1□□□□□ -0.63
CD46-214ENST00000480003 TRPA1O75762 1119 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 STAT3P40763 770 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
CD46-214ENST00000480003 CPLX2Q6PUV4 134 aaKnown RBP11.1□□□□□ -0.63
CD46-214ENST00000480003 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 PHKBQ93100 1093 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 RRP36Q96EU6 259 aaKnown RBP11.1□□□□□ -0.63
CD46-214ENST00000480003 INTS4Q96HW7 963 aaKnown RBP11.1□□□□□ -0.63
CD46-214ENST00000480003 AGBL1Q96MI9 1066 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 RAVER2Q9HCJ3 691 aaKnown RBP11.1□□□□□ -0.63
CD46-214ENST00000480003 RIPK3Q9Y572 518 aa11.1□□□□□ -0.63
CD46-214ENST00000480003 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 DTNBO60941 627 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 CDKL5O76039 1030 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 TBC1D8O95759 1140 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 ICAM1P05362 532 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 ERVK-24P63145 666 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 PFKFB3Q16875 520 aaPredicted RBP11.09□□□□□ -0.63
CD46-214ENST00000480003 FAM110CQ1W6H9 321 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
CD46-214ENST00000480003 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
CD46-214ENST00000480003 SLC26A6Q9BXS9 759 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms