RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 KLRC4O43908 158 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 PRCPP42785 496 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 HDLBPQ00341 1268 aaKnown RBP14.67□□□□□ -0.06
SEC13-216ENST00000479868 PAK1Q13153 545 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 GPATCH4Q5T3I0 446 aaKnown RBP14.67□□□□□ -0.06
SEC13-216ENST00000479868 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
SEC13-216ENST00000479868 AK8Q96MA6 479 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 PI4KBQ9UBF8 816 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 USP17L10C9JJH3 530 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 ZNF710Q8N1W2 664 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 NELFBQ8WX92 580 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 SERPINA10Q9UK55 444 aa14.67□□□□□ -0.06
SEC13-216ENST00000479868 CTIFO43310 598 aaKnown RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 SLC37A4O43826 429 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 TDP2O95551 362 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 EN1Q05925 392 aaPredicted RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 HSP90AA2PQ14568 343 aaPredicted RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 UBE2SQ16763 222 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 CERKLQ49MI3 558 aaPredicted RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 KMT5BQ4FZB7 885 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 IGSF22Q8N9C0 903 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 MMTAG2Q9BU76 263 aaKnown RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 ZBTB5O15062 677 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 RRP9O43818 475 aaKnown RBP14.66□□□□□ -0.06
SEC13-216ENST00000479868 RAD21O60216 631 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 PBX1P40424 430 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 TXKP42681 527 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 RIC8AQ9NPQ8 531 aa14.66□□□□□ -0.06
SEC13-216ENST00000479868 MYH7BA7E2Y1 1941 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 YDJCA8MPS7 323 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 ORC2Q13416 577 aaPredicted RBP14.65□□□□□ -0.06
SEC13-216ENST00000479868 KCNB1Q14721 858 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 PPP1R18Q6NYC8 613 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 ADSSL1Q8N142 457 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 MTMR8Q96EF0 704 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 CTAGE1Q96RT6 745 aa14.65□□□□□ -0.06
SEC13-216ENST00000479868 BAG1Q99933 345 aaPredicted RBP14.65□□□□□ -0.06
SEC13-216ENST00000479868 TDRD3Q9H7E2 651 aaKnown RBP14.65□□□□□ -0.06
SEC13-216ENST00000479868 MYL1P05976 194 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 CCT6AP40227 531 aaKnown RBP14.65□□□□□ -0.07
SEC13-216ENST00000479868 TNNI2P48788 182 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 CLK2P49760 499 aaKnown RBP14.65□□□□□ -0.07
SEC13-216ENST00000479868 SEPT2Q15019 361 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 KRT31Q15323 416 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 CALCRLQ16602 461 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 TATDN1Q6P1N9 297 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 SIAH1Q8IUQ4 282 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 CAMKK2Q96RR4 588 aa14.65□□□□□ -0.07
SEC13-216ENST00000479868 TRIM49BA6NDI0 452 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 ARHGAP6O43182 974 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 C21orf2O43822 256 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 RHOBTB3O94955 611 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 PMS1P54277 932 aaKnown RBP14.64□□□□□ -0.07
SEC13-216ENST00000479868 MKL1Q969V6 931 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 PDGFDQ9GZP0 370 aaPredicted RBP14.64□□□□□ -0.07
SEC13-216ENST00000479868 CUEDC2Q9H467 287 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 KANSL2Q9H9L4 492 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 NYAP2Q9P242 653 aa14.64□□□□□ -0.07
SEC13-216ENST00000479868 KIF2AO00139 706 aaPredicted RBP14.63□□□□□ -0.07
SEC13-216ENST00000479868 GDF11O95390 407 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 SLC1A4P43007 532 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 KIF18AQ8NI77 898 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 CUL5Q93034 780 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 PRMT6Q96LA8 375 aaPredicted RBP14.63□□□□□ -0.07
SEC13-216ENST00000479868 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 TRIM9Q9C026 710 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 MAGEF1Q9HAY2 307 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 LIMA1Q9UHB6 759 aaKnown RBP14.63□□□□□ -0.07
SEC13-216ENST00000479868 LRRC10BA6NIK2 292 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 PPIP5K2O43314 1243 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 STX10O60499 249 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
SEC13-216ENST00000479868 RBL2Q08999 1139 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 FILIP1LQ4L180 1135 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 TCP11X2Q5H9J9 407 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 REXO1L1PQ8IX06 675 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 GIMAP8Q8ND71 665 aaPredicted RBP14.63□□□□□ -0.07
SEC13-216ENST00000479868 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
SEC13-216ENST00000479868 POTEMA6NI47 508 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 KCNJ18B7U540 433 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
SEC13-216ENST00000479868 ICA1Q05084 483 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 KCNJ12Q14500 433 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 SLFN13Q68D06 897 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 SYT10Q6XYQ8 523 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 FCHSD1Q86WN1 690 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 IRF2BP1Q8IU81 584 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 PSTPIP2Q9H939 334 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 LRWD1Q9UFC0 647 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 AKR1B15C9JRZ8 316 aaPredicted RBP14.62□□□□□ -0.07
SEC13-216ENST00000479868 JAG1P78504 1218 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 GRB10Q13322 594 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
SEC13-216ENST00000479868 CPLX3Q8WVH0 158 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms