RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZNF214Q9UL59 606 aaPredicted RBP6.92□□□□□ -1.3
UBR3-209ENST00000477461 FHOD1Q9Y613 1164 aa6.92□□□□□ -1.3
UBR3-209ENST00000477461 FGF10O15520 208 aaPredicted RBP6.91□□□□□ -1.3
UBR3-209ENST00000477461 BUB1BO60566 1050 aaPredicted RBP6.91□□□□□ -1.3
UBR3-209ENST00000477461 VAMP4O75379 141 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 BUD31P41223 144 aaPredicted RBP6.91□□□□□ -1.3
UBR3-209ENST00000477461 PPP2R5EQ16537 467 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 DPY19L1Q2PZI1 675 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 BICRALQ6AI39 1079 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
UBR3-209ENST00000477461 FAM129CQ86XR2 697 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 FGD4Q96M96 766 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 PWWP2AQ96N64 755 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 KCNC2Q96PR1 638 aa6.91□□□□□ -1.3
UBR3-209ENST00000477461 SF3B6Q9Y3B4 125 aaKnown RBP6.91□□□□□ -1.3
UBR3-209ENST00000477461 CCDC180Q9P1Z9 1646 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 IRS4O14654 1257 aaPredicted RBP6.9□□□□□ -1.3
UBR3-209ENST00000477461 SCAMP3O14828 347 aaKnown RBP6.9□□□□□ -1.3
UBR3-209ENST00000477461 CBFA2T2O43439 604 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 RECKO95980 971 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 EIF6P56537 245 aaKnown RBP6.9□□□□□ -1.3
UBR3-209ENST00000477461 ZNF200P98182 395 aaPredicted RBP6.9□□□□□ -1.3
UBR3-209ENST00000477461 TMEM62Q0P6H9 643 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.3
UBR3-209ENST00000477461 FEZF2Q8TBJ5 459 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 RELTQ969Z4 430 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 PTCHD1Q96NR3 888 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 RXFP1Q9HBX9 757 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 PCDHA5Q9Y5H7 936 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 NCANO14594 1321 aa6.9□□□□□ -1.3
UBR3-209ENST00000477461 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
UBR3-209ENST00000477461 F8W031 263 aaPredicted RBP6.89□□□□□ -1.31
UBR3-209ENST00000477461 LIMS1P48059 325 aa6.89□□□□□ -1.31
UBR3-209ENST00000477461 POU4F1Q01851 419 aa6.89□□□□□ -1.31
UBR3-209ENST00000477461 CBX2Q14781 532 aaPredicted RBP6.89□□□□□ -1.31
UBR3-209ENST00000477461 ZC3H14Q6PJT7 736 aaKnown RBP6.89□□□□□ -1.31
UBR3-209ENST00000477461 METTL16Q86W50 562 aaKnown RBP6.89□□□□□ -1.31
UBR3-209ENST00000477461 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
UBR3-209ENST00000477461 HAUS7Q99871 368 aa6.89□□□□□ -1.31
UBR3-209ENST00000477461 MCMBPQ9BTE3 642 aa6.89□□□□□ -1.31
UBR3-209ENST00000477461 RAPGEFL1Q9UHV5 662 aa6.89□□□□□ -1.31
UBR3-209ENST00000477461 ZC3H12DA2A288 527 aaKnown RBP6.88□□□□□ -1.31
UBR3-209ENST00000477461 OTOL1A6NHN0 477 aaPredicted RBP6.88□□□□□ -1.31
UBR3-209ENST00000477461 SASH1O94885 1247 aa6.88□□□□□ -1.31
UBR3-209ENST00000477461 TBC1D8O95759 1140 aa6.88□□□□□ -1.31
UBR3-209ENST00000477461 DBHP09172 617 aa6.88□□□□□ -1.31
UBR3-209ENST00000477461 HEATR6Q6AI08 1181 aaKnown RBP6.88□□□□□ -1.31
UBR3-209ENST00000477461 RGS22Q8NE09 1264 aa6.88□□□□□ -1.31
UBR3-209ENST00000477461 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
UBR3-209ENST00000477461 PDLIM7Q9NR12 457 aa6.88□□□□□ -1.31
UBR3-209ENST00000477461 DBR1Q9UK59 544 aaKnown RBP6.88□□□□□ -1.31
UBR3-209ENST00000477461 DIS3Q9Y2L1 958 aaKnown RBP6.88□□□□□ -1.31
UBR3-209ENST00000477461 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 STXBP3O00186 592 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 EPHX1P07099 455 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 MAPKAPK2P49137 400 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 PRR5P85299 388 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 SLC7A5Q01650 507 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 NR1I3Q14994 352 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 NT5DC4Q86YG4 428 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 CPLX3Q8WVH0 158 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 BCAS3Q9H6U6 928 aa6.87□□□□□ -1.31
UBR3-209ENST00000477461 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
UBR3-209ENST00000477461 FOXD2O60548 495 aaPredicted RBP6.86□□□□□ -1.31
UBR3-209ENST00000477461 L1CAMP32004 1257 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 SOX9P48436 509 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 GIPRP48546 466 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 NASPP49321 788 aaPredicted RBP6.86□□□□□ -1.31
UBR3-209ENST00000477461 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 CYP2R1Q6VVX0 501 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 GPRASP2Q96D09 838 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 XYLT2Q9H1B5 865 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 WHRNQ9P202 907 aa6.86□□□□□ -1.31
UBR3-209ENST00000477461 A0A087WZG4 1122 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 CYBBP04839 570 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 PFKLP17858 780 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
UBR3-209ENST00000477461 COL9A2Q14055 689 aaPredicted RBP6.85□□□□□ -1.31
UBR3-209ENST00000477461 ADGRG2Q8IZP9 1017 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 KLHL25Q9H0H3 589 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 GBP3Q9H0R5 595 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 RWDD3Q9Y3V2 267 aa6.85□□□□□ -1.31
UBR3-209ENST00000477461 IRS2Q9Y4H2 1338 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 PPP1R11O60927 126 aaPredicted RBP6.84□□□□□ -1.31
UBR3-209ENST00000477461 PPM1BO75688 479 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 SEPHS1P49903 392 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 NFIXQ14938 502 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 KIAA1211LQ6NV74 962 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 MRRFQ96E11 262 aaKnown RBP6.84□□□□□ -1.31
UBR3-209ENST00000477461 PHAXQ9H814 394 aaKnown RBP6.84□□□□□ -1.31
UBR3-209ENST00000477461 SLC12A7Q9Y666 1083 aa6.84□□□□□ -1.31
UBR3-209ENST00000477461 A0A1B0GTL3 188 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 C2orf71A6NGG8 1288 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 AURKAO14965 403 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 ATF2P15336 505 aa6.83□□□□□ -1.32
UBR3-209ENST00000477461 MC3RP41968 323 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms