RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
VAPB-204ENST00000475243 MTMR3Q13615 1198 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 TTC19Q6DKK2 380 aaPredicted RBP12.01□□□□□ -0.49
VAPB-204ENST00000475243 BAIAP2L1Q9UHR4 511 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 ZNF804BA4D1E1 1349 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 SMYD2Q9NRG4 433 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 PCDHB4Q9Y5E5 795 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 PPFIA1Q13136 1202 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 SMYD4Q8IYR2 804 aaPredicted RBP12.01□□□□□ -0.49
VAPB-204ENST00000475243 TRIM37O94972 964 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 LRRC43Q8N309 656 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 PHBP35232 272 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 RASSF7Q02833 373 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
VAPB-204ENST00000475243 DCAF15Q66K64 600 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 ARHGAP24Q8N264 748 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 PGBD1Q96JS3 809 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 BZW2Q9Y6E2 419 aaKnown RBP12.01□□□□□ -0.49
VAPB-204ENST00000475243 ADCY9O60503 1353 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 BAG2O95816 211 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 SLC16A2P36021 539 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 LRCH2Q5VUJ6 765 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 HESX1Q9UBX0 185 aa12.01□□□□□ -0.49
VAPB-204ENST00000475243 DYNLL1P63167 89 aaKnown RBP12□□□□□ -0.49
VAPB-204ENST00000475243 MCF2L2Q86YR7 1114 aa12□□□□□ -0.49
VAPB-204ENST00000475243 RNF10Q8N5U6 811 aaKnown RBP12□□□□□ -0.49
VAPB-204ENST00000475243 RPS6KC1Q96S38 1066 aa12□□□□□ -0.49
VAPB-204ENST00000475243 ZNF148Q9UQR1 794 aa12□□□□□ -0.49
VAPB-204ENST00000475243 RABGAP1Q9Y3P9 1069 aa12□□□□□ -0.49
VAPB-204ENST00000475243 MESDQ14696 234 aa12□□□□□ -0.49
VAPB-204ENST00000475243 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
VAPB-204ENST00000475243 CLNS1AP54105 237 aaKnown RBP12□□□□□ -0.49
VAPB-204ENST00000475243 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
VAPB-204ENST00000475243 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
VAPB-204ENST00000475243 PABPC4Q13310 644 aaKnown RBP eCLIP12□□□□□ -0.492e-7■■■■■ 37.8
VAPB-204ENST00000475243 ODR4Q5SWX8 454 aa12□□□□□ -0.49
VAPB-204ENST00000475243 CSRNP1Q96S65 589 aa12□□□□□ -0.49
VAPB-204ENST00000475243 DBNDD1Q9H9R9 158 aa12□□□□□ -0.49
VAPB-204ENST00000475243 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
VAPB-204ENST00000475243 PPME1Q9Y570 386 aa12□□□□□ -0.49
VAPB-204ENST00000475243 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
VAPB-204ENST00000475243 H7C0C1 242 aa12□□□□□ -0.49
VAPB-204ENST00000475243 SLC4A1P02730 911 aa12□□□□□ -0.49
VAPB-204ENST00000475243 ATP5OP48047 213 aa12□□□□□ -0.49
VAPB-204ENST00000475243 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
VAPB-204ENST00000475243 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
VAPB-204ENST00000475243 KIF22Q14807 665 aa12□□□□□ -0.49
VAPB-204ENST00000475243 RSPH3Q86UC2 560 aa12□□□□□ -0.49
VAPB-204ENST00000475243 P3H4Q92791 437 aa12□□□□□ -0.49
VAPB-204ENST00000475243 PPP1R16BQ96T49 567 aa12□□□□□ -0.49
VAPB-204ENST00000475243 ZNF277Q9NRM2 450 aaPredicted RBP12□□□□□ -0.49
VAPB-204ENST00000475243 M0R2C6 588 aa12□□□□□ -0.49
VAPB-204ENST00000475243 TM6SF1Q9BZW5 370 aa12□□□□□ -0.49
VAPB-204ENST00000475243 VCXQ9H320 206 aa12□□□□□ -0.49
VAPB-204ENST00000475243 KCNG1Q9UIX4 513 aa12□□□□□ -0.49
VAPB-204ENST00000475243 TMTC4Q5T4D3 741 aa12□□□□□ -0.49
VAPB-204ENST00000475243 ZNF653Q96CK0 615 aa12□□□□□ -0.49
VAPB-204ENST00000475243 COL4A3BPQ9Y5P4 624 aa12□□□□□ -0.49
VAPB-204ENST00000475243 POC1B-GALNT4F8VUJ3 575 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 TLR7Q9NYK1 1049 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 A0A087WWV3 80 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 LOC102724428A0A0B4J2F2 783 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 SGK1O00141 431 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 WDR46O15213 610 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 LRRN2O75325 713 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 TROVE2P10155 538 aaKnown RBP eCLIP11.99□□□□□ -0.498e-6■■■■□ 26.6
VAPB-204ENST00000475243 PDIA3P30101 505 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 RFC1P35251 1148 aaPredicted RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 SIK1P57059 783 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 ZNF577Q9BSK1 485 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 MEIS1O00470 390 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 EXOC3L4Q17RC7 722 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 PHLDB2Q86SQ0 1253 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 CROCCP2Q86T23 111 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 LRRC8AQ8IWT6 810 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 KIF3CO14782 793 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 BRD1O95696 1058 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 EHHADHQ08426 723 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 RBBP5Q15291 538 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 RAPH1Q70E73 1250 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 HAUS1Q96CS2 278 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 PPP2R2CQ9Y2T4 447 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 PFKFB2O60825 505 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 ECE1P42892 770 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 BFSP1Q12934 665 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 TSNAXIP1Q2TAA8 658 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 KIF1BO60333 1816 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
VAPB-204ENST00000475243 RNF40O75150 1001 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 RNF8O76064 485 aa11.99□□□□□ -0.49
VAPB-204ENST00000475243 GDF11O95390 407 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms