RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TLK2Q86UE8 772 aa29.49■■■□□ 2.31
TMEM54-205ENST00000475208 MTMR7Q9Y216 660 aa29.49■■■□□ 2.31
TMEM54-205ENST00000475208 GNEQ9Y223 722 aaKnown RBP29.49■■■□□ 2.31
TMEM54-205ENST00000475208 DDX49Q9Y6V7 483 aaKnown RBP29.49■■■□□ 2.31
TMEM54-205ENST00000475208 SALL3Q9BXA9 1300 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 CSF2RAP15509 400 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 GRIN2CQ14957 1233 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 MUM1L1Q5H9M0 696 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 TMEM240Q5SV17 173 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 VPS53Q5VIR6 699 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 CXCL17Q6UXB2 119 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 C16orf59Q7L2K0 433 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 TMEM199Q8N511 208 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 VCANP13611 3396 aa29.48■■■□□ 2.31
TMEM54-205ENST00000475208 RANBP6O60518 1105 aaKnown RBP29.47■■■□□ 2.31
TMEM54-205ENST00000475208 TIFAQ96CG3 184 aa29.47■■■□□ 2.31
TMEM54-205ENST00000475208 CYP39A1Q9NYL5 469 aa29.47■■■□□ 2.31
TMEM54-205ENST00000475208 ANAPC4Q9UJX5 808 aa29.47■■■□□ 2.31
TMEM54-205ENST00000475208 CCPG1Q9ULG6 757 aa29.47■■■□□ 2.31
TMEM54-205ENST00000475208 CD4P01730 458 aa29.46■■■□□ 2.31
TMEM54-205ENST00000475208 PTGS1P23219 599 aa29.46■■■□□ 2.31
TMEM54-205ENST00000475208 FSCN1Q16658 493 aaKnown RBP29.46■■■□□ 2.31
TMEM54-205ENST00000475208 CCDC96Q2M329 555 aa29.46■■■□□ 2.31
TMEM54-205ENST00000475208 ZNF576Q9H609 170 aa29.46■■■□□ 2.31
TMEM54-205ENST00000475208 ACRP10323 421 aa29.45■■■□□ 2.31
TMEM54-205ENST00000475208 SMPD1P17405 629 aa29.45■■■□□ 2.31
TMEM54-205ENST00000475208 PSRC1Q6PGN9 363 aaPredicted RBP29.45■■■□□ 2.31
TMEM54-205ENST00000475208 NSMFQ6X4W1 530 aa29.45■■■□□ 2.31
TMEM54-205ENST00000475208 EEPD1Q7L9B9 569 aa29.45■■■□□ 2.31
TMEM54-205ENST00000475208 FBXO16Q8IX29 292 aaPredicted RBP29.45■■■□□ 2.31
TMEM54-205ENST00000475208 AP5M1Q9H0R1 490 aa29.45■■■□□ 2.31
TMEM54-205ENST00000475208 PDGFCQ9NRA1 345 aa29.45■■■□□ 2.31
TMEM54-205ENST00000475208 DYNC1LI2O43237 492 aaPredicted RBP29.44■■■□□ 2.3
TMEM54-205ENST00000475208 ORC4O43929 436 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 CABYRO75952 493 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 CYP2C18P33260 490 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 NOVP48745 357 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 RASIP1Q5U651 963 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 SLC43A3Q8NBI5 491 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 DCAF4Q8WV16 495 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 EVI5LQ96CN4 794 aa29.44■■■□□ 2.3
TMEM54-205ENST00000475208 ZBTB47Q9UFB7 747 aaPredicted RBP29.44■■■□□ 2.3
TMEM54-205ENST00000475208 ICAM1P05362 532 aa29.43■■■□□ 2.3
TMEM54-205ENST00000475208 TAPT1Q6NXT6 567 aa29.43■■■□□ 2.3
TMEM54-205ENST00000475208 ZNF365Q70YC5 407 aa29.43■■■□□ 2.3
TMEM54-205ENST00000475208 LCTP09848 1927 aa29.43■■■□□ 2.3
TMEM54-205ENST00000475208 GRXCR1A8MXD5 290 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 ITGA7Q13683 1181 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 ANKRD45Q5TZF3 282 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 IQSEC1Q6DN90 963 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 TTBK2Q6IQ55 1244 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 PURBQ96QR8 312 aaKnown RBP29.42■■■□□ 2.3
TMEM54-205ENST00000475208 PBX4Q9BYU1 374 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 RANBP17Q9H2T7 1088 aaKnown RBP29.42■■■□□ 2.3
TMEM54-205ENST00000475208 TOMM22Q9NS69 142 aa29.42■■■□□ 2.3
TMEM54-205ENST00000475208 ZEB2O60315 1214 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 PBX2P40425 430 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 ALX1Q15699 326 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 HIPK3Q9H422 1215 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 VTA1Q9NP79 307 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 IL23AQ9NPF7 189 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 HELLSQ9NRZ9 838 aa29.41■■■□□ 2.3
TMEM54-205ENST00000475208 FGRP09769 529 aa29.4■■■□□ 2.3
TMEM54-205ENST00000475208 SLC16A2P36021 539 aa29.4■■■□□ 2.3
TMEM54-205ENST00000475208 TMEM63BQ5T3F8 832 aa29.4■■■□□ 2.3
TMEM54-205ENST00000475208 Q9Y3F1 56 aa29.4■■■□□ 2.3
TMEM54-205ENST00000475208 GRIN2DO15399 1336 aa29.4■■■□□ 2.3
TMEM54-205ENST00000475208 RRP12Q5JTH9 1297 aaKnown RBP29.39■■■□□ 2.3
TMEM54-205ENST00000475208 SYDE2Q5VT97 1194 aa29.39■■■□□ 2.3
TMEM54-205ENST00000475208 BTNL9Q6UXG8 535 aa29.39■■■□□ 2.3
TMEM54-205ENST00000475208 KIAA1211Q6ZU35 1233 aa29.39■■■□□ 2.3
TMEM54-205ENST00000475208 USP38Q8NB14 1042 aa29.39■■■□□ 2.3
TMEM54-205ENST00000475208 MORC4Q8TE76 937 aa29.39■■■□□ 2.3
TMEM54-205ENST00000475208 UMODL1Q5DID0 1318 aa29.39■■■□□ 2.3
TMEM54-205ENST00000475208 SPTBN5Q9NRC6 3674 aaKnown RBP29.39■■■□□ 2.29
TMEM54-205ENST00000475208 TOP1P11387 765 aaKnown RBP29.38■■■□□ 2.29
TMEM54-205ENST00000475208 BAATQ14032 418 aaPredicted RBP29.38■■■□□ 2.29
TMEM54-205ENST00000475208 HERVK_113Q902F9 699 aa29.38■■■□□ 2.29
TMEM54-205ENST00000475208 FAM227BQ96M60 508 aa29.38■■■□□ 2.29
TMEM54-205ENST00000475208 TMEM47Q9BQJ4 181 aa29.38■■■□□ 2.29
TMEM54-205ENST00000475208 SEZ6LQ9BYH1 1024 aa29.38■■■□□ 2.29
TMEM54-205ENST00000475208 FRMPD2Q68DX3 1309 aaPredicted RBP29.38■■■□□ 2.29
TMEM54-205ENST00000475208 A0A0D9SFI3 127 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 NFIBO00712 420 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 FGAP02671 866 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 ALDH5A1P51649 535 aaPredicted RBP29.37■■■□□ 2.29
TMEM54-205ENST00000475208 PDE1AP54750 535 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 RRP1P56182 461 aaKnown RBP29.37■■■□□ 2.29
TMEM54-205ENST00000475208 PSMC6P62333 389 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 TRPV6Q9H1D0 765 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 MTIF3Q9H2K0 278 aaKnown RBP29.37■■■□□ 2.29
TMEM54-205ENST00000475208 GPCPD1Q9NPB8 672 aa29.37■■■□□ 2.29
TMEM54-205ENST00000475208 ADD3Q9UEY8 706 aaKnown RBP29.37■■■□□ 2.29
TMEM54-205ENST00000475208 B4GALT4O60513 344 aa29.36■■■□□ 2.29
TMEM54-205ENST00000475208 MCMDC2Q4G0Z9 681 aa29.36■■■□□ 2.29
TMEM54-205ENST00000475208 NOC4LQ9BVI4 516 aaKnown RBP29.36■■■□□ 2.29
TMEM54-205ENST00000475208 CXXC1Q9P0U4 656 aaPredicted RBP29.36■■■□□ 2.29
TMEM54-205ENST00000475208 FGBP02675 491 aa29.35■■■□□ 2.29
TMEM54-205ENST00000475208 CCL23P55773 120 aa29.35■■■□□ 2.29
TMEM54-205ENST00000475208 DUSP28Q4G0W2 176 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms