RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MCM4P33991 863 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 OAZ1P54368 228 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 CEBPZQ03701 1054 aaKnown RBP11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 FSTL1Q12841 308 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 NR5A1Q13285 461 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 DGKZQ13574 1117 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 PIK3AP1Q6ZUJ8 805 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 CCAR1Q8IX12 1150 aaKnown RBP11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 ATG4CQ96DT6 458 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 GCOM1H8Y6P7 765 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 VWA5AO00534 786 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 KIF3CO14782 793 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 MARCH6O60337 910 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 CFBP00751 764 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 FOSP01100 380 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 POLR2MP0CAP2 368 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 COPB2P35606 906 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 TRAPPC10P48553 1259 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 AP3B2Q13367 1082 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 TKFCQ3LXA3 575 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 PARP14Q460N5 1801 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 SNRNP48Q6IEG0 339 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 RGMBQ6NW40 437 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 KCNG4Q8TDN1 519 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 CCDC102AQ96A19 550 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 PAGR1Q9BTK6 254 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 TEX13BQ9BXU2 312 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 RAVER2Q9HCJ3 691 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 HOMER2Q9NSB8 354 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 BIN2Q9UBW5 565 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
PRPF38A-202ENST00000474048 MANSC4A6NHS7 340 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 YEATS4O95619 227 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 HOXA7P31268 230 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 ME1P48163 572 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 SREBF2Q12772 1141 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 NBR1Q14596 966 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 TTC38Q5R3I4 469 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 TREML2Q5T2D2 321 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 JAKMIP3Q5VZ66 844 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 SPRYD7Q5W111 196 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 PARK7Q99497 189 aaKnown RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-202ENST00000474048 PASKQ96RG2 1323 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 TCHHQ07283 1943 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 MBD3O95983 291 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 CCNA1P78396 465 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 GRM1Q13255 1194 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 UBE2SQ16763 222 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 CST9Q5W186 159 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 ANO1Q5XXA6 986 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 NEK8Q86SG6 692 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 RASGRP4Q8TDF6 673 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 TRERF1Q96PN7 1200 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 ACAD9Q9H845 621 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 RNF146Q9NTX7 359 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 PCDHA6Q9UN73 950 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 SLC45A1Q9Y2W3 748 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 PCDHA8Q9Y5H6 950 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
PRPF38A-202ENST00000474048 ELP1O95163 1332 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 PDHXO00330 501 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 SPTLC2O15270 562 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 ZNF76P36508 570 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 STAT3P40763 770 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 INHBEP58166 350 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 HERVK_113P62684 666 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 ORC2Q13416 577 aaPredicted RBP11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 INF2Q27J81 1249 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 LETM2Q2VYF4 491 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 WDR78Q5VTH9 848 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 ANKRD23Q86SG2 305 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 FCHSD1Q86WN1 690 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
PRPF38A-202ENST00000474048 TBCKQ8TEA7 893 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms