RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 KCNB1Q14721 858 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 HNRNPLLQ8WVV9 542 aaKnown RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 PYM1Q9BRP8 204 aaKnown RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 CCSER1Q9C0I3 900 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 ATP1A1P05023 1023 aaKnown RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 RASA1P20936 1047 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 UBA7P41226 1012 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 TRIM14Q14142 442 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 DAGLBQ8NCG7 672 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 OR8K1Q8NGG5 319 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 LACRTQ9GZZ8 138 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 NARFQ9UHQ1 456 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 MYO6Q9UM54 1294 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 DUSP10Q9Y6W6 482 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 TSPY3P0CV98 308 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 TSPY8P0CW00 308 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.44
C9orf3-214ENST00000473778 MIIPQ5JXC2 388 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 ANKRD40Q6AI12 368 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 CERS3Q8IU89 383 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 MAPKAPK5Q8IW41 473 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.44
C9orf3-214ENST00000473778 ANKRD2Q9GZV1 360 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 MKNK2Q9HBH9 465 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 ADAM21Q9UKJ8 722 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 CAPN11Q9UMQ6 739 aa12.27□□□□□ -0.44
C9orf3-214ENST00000473778 A0A1W2PQC6 194 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 LDHBP07195 334 aaKnown RBP12.27□□□□□ -0.45
C9orf3-214ENST00000473778 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 USP17L2Q6R6M4 530 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 BARGINQ6ZT62 677 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 ANKRD20A12PQ8NF67 263 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
C9orf3-214ENST00000473778 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.45
C9orf3-214ENST00000473778 CTAGE15A4D2H0 777 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 CTAGE8P0CG41 777 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 SRGNP10124 158 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 EEF1GP26641 437 aaKnown RBP12.26□□□□□ -0.45
C9orf3-214ENST00000473778 MEA1Q16626 185 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 WHAMMP3Q1A5X7 153 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 LETM2Q2VYF4 491 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 CTAGE6Q86UF2 777 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 CTAGE4Q8IX94 777 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 KIAA0895Q8NCT3 520 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 TUBGCP2Q9BSJ2 902 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 ZMYND12Q9H0C1 365 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 LRRIQ3A6PVS8 624 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-214ENST00000473778 KLRF2D3W0D1 207 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 PSMD14O00487 310 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 ZNF263O14978 683 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 GNPATO15228 680 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 EDIL3O43854 480 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 CCNT1O60563 726 aaKnown RBP12.26□□□□□ -0.45
C9orf3-214ENST00000473778 PLEKP08567 350 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-214ENST00000473778 FAM182BQ5T319 152 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 CABP7Q86V35 215 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 CSGALNACT2Q8N6G5 542 aa12.26□□□□□ -0.45
C9orf3-214ENST00000473778 RTFDC1Q9BY42 306 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-214ENST00000473778 MYH10P35580 1976 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 PSMA7O14818 248 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 EPHB6O15197 1021 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 TECP42680 631 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 CYP27A1Q02318 531 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 CCDC122Q5T0U0 273 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 NYXQ9GZU5 481 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 TCP11L1Q9NUJ3 509 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 PDE2AO00408 941 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-214ENST00000473778 ZNF185O15231 689 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 PRPHP41219 470 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 PDE4DQ08499 809 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 CASP8Q14790 479 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 SECISBP2LQ93073 1101 aaKnown RBP12.25□□□□□ -0.45
C9orf3-214ENST00000473778 P2RX5Q93086 422 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 CNOT6LQ96LI5 555 aaKnown RBP12.25□□□□□ -0.45
C9orf3-214ENST00000473778 SEMA6BQ9H3T3 888 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 TMEM260Q9NX78 707 aa12.25□□□□□ -0.45
C9orf3-214ENST00000473778 RPS6KA4O75676 772 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 OR52Z1P0C646 297 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 DNM2P50570 870 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 NAPAP54920 295 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 PIP4K2BP78356 416 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 TUBB2AQ13885 445 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 TPTE2Q6XPS3 522 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 HDXQ7Z353 690 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
C9orf3-214ENST00000473778 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-214ENST00000473778 CCDC148Q8NFR7 591 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms