RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GSDMDP57764 484 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 GPLD1P80108 840 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 LONRF2Q1L5Z9 754 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 HSP90B2PQ58FF3 399 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 SARM1Q6SZW1 724 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 SPATA21Q7Z572 469 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 TMEM102Q8N9M5 508 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 C3orf20Q8ND61 904 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ATP6V0A4Q9HBG4 840 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ATP6V1DQ9Y5K8 247 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 FAM169AQ9Y6X4 670 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 NRXN3Q9Y4C0 1643 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ANKRD65E5RJM6 399 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 AHCYL1O43865 530 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ALDH1B1P30837 517 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 NAP1L1P55209 391 aaKnown RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 EVCP57679 992 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 BRAPQ7Z569 592 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 MFN1Q8IWA4 741 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 CNNM3Q8NE01 707 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 NXPE3Q969Y0 559 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 CHAMP1Q96JM3 812 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 HHIPQ96QV1 700 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ZFYVE1Q9HBF4 777 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 LMCD1Q9NZU5 365 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 APAF1O14727 1248 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 SMARCA5O60264 1052 aaPredicted RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 TUBB4BP68371 445 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 CCZ1BP86790 482 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 CCZ1P86791 482 aaPredicted RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 CTBSQ01459 385 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 PWP1Q13610 501 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 PLCB4Q15147 1175 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC178Q5BJE1 867 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 TLDC1Q6P9B6 456 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 GIMAP6Q6P9H5 292 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 MYLK4Q86YV6 388 aaPredicted RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 OR8K1Q8NGG5 319 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 DHX38Q92620 1227 aaKnown RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 GCC1Q96CN9 775 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 IRX2Q9BZI1 471 aaPredicted RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 GMPR2Q9P2T1 348 aaKnown RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 LOC102724428A0A0B4J2F2 783 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 FBXO24O75426 580 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 FESP07332 822 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 SIK1P57059 783 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 ETF1P62495 437 aaKnown RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 IQCB1Q15051 598 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 RELL1Q8IUW5 271 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 LRRN4CLQ8ND94 238 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 EZH1Q92800 747 aaPredicted RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 GPRASP2Q96D09 838 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 ZBTB10Q96DT7 871 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 TMEM74Q96NL1 305 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 OSBPL9Q96SU4 736 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 ADAMTS1Q9UHI8 967 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 RGPD1P0DJD0 1748 aa5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.81□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC69A6NI79 296 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 METTL12A8MUP2 240 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 NPHP4O75161 1426 aaPredicted RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 ERLIN1O75477 346 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SNRPBP14678 240 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 NOS1P29475 1434 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 FNTAP49354 379 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 MAP3K11Q16584 847 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SPRED3Q2MJR0 410 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC144BQ3MJ40 725 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 USP54Q70EL1 1684 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 MCF2L2Q86YR7 1114 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC144CPQ8IYA2 1237 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 MIPOL1Q8TD10 442 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 RASGRP4Q8TDF6 673 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 RREB1Q92766 1687 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SPACA7Q96KW9 195 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 LNPKQ9C0E8 428 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PDE11AQ9HCR9 933 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 RGL1Q9NZL6 768 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 FAN1Q9Y2M0 1017 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 J3QW42 95 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TPD52L2O43399 206 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 SHOX2O60902 331 aaPredicted RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PYGLP06737 847 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 FGRP09769 529 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 ATF4P18848 351 aaPredicted RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 ARHGAP25P42331 645 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 MLLT1Q03111 559 aaPredicted RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 LAMB3Q13751 1172 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 NAA25Q14CX7 972 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 CEP85LQ5SZL2 805 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 INTS3Q68E01 1043 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 TPTE2Q6XPS3 522 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 RSRC2Q7L4I2 434 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 VPS37DQ86XT2 251 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 C17orf50Q8WW18 174 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 RSRC1Q96IZ7 334 aaKnown RBP5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PPP1R13BQ96KQ4 1090 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 AGAP3Q96P47 875 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 PBX4Q9BYU1 374 aa5.8□□□□□ -1.48
TMEM39A-206ENST00000473684 UBA5Q9GZZ9 404 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms