RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TAAR9Q96RI9 348 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 WDR18Q9BV38 432 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 USP26Q9BXU7 913 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 NUCKS1Q9H1E3 243 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 SEMA4AQ9H3S1 761 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PLCB1Q9NQ66 1216 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 POLHQ9Y253 713 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 HECW2Q9P2P5 1572 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 STXBP3O00186 592 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 TGM5O43548 720 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 POU3F2P20265 443 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 CD247P20963 164 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 KCNJ6P48051 423 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PMS1P54277 932 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 GFRA1P56159 465 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ZNF445P59923 1031 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 CHAF1AQ13111 956 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 HDAC1Q13547 482 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 HSP90AA2PQ14568 343 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 CLUL1Q15846 466 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 LONRF2Q1L5Z9 754 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 BROXQ5VW32 411 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 INTS3Q68E01 1043 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 GTF2IRD2BQ6EKJ0 949 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 GTF2IRD2Q86UP8 949 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 NGDNQ8NEJ9 315 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 ZDHHC15Q96MV8 337 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 STRBPQ96SI9 672 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 GTPBP4Q9BZE4 634 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 MKRN2Q9H000 416 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 C11orf16Q9NQ32 467 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 INTS7Q9NVH2 962 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 BSDC1Q9NW68 430 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 TPX2Q9ULW0 747 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 TOP2BQ02880 1626 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 ANKRD34BA5PLL1 514 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 BTBD11A6QL63 1104 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 TMEM253P0C7T8 217 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 ZBTB48P10074 688 aaPredicted RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 RRM1P23921 792 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 GTF2A2P52657 109 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 GUCY1A3Q02108 690 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 DHCR24Q15392 516 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 VPS72Q15906 364 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 GRIK5Q16478 980 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 TMEM95Q3KNT9 176 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 RPS26P11Q5JNZ5 115 aaPredicted RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 BVESQ8NE79 360 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 FAXDC2Q96IV6 333 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 SCYL1Q96KG9 808 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 CRB3Q9BUF7 120 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 PRDM12Q9H4Q4 367 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 GTF2IRD1Q9UHL9 959 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 GPC6Q9Y625 555 aaPredicted RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 LOC100289279A0A1B0GTE1 492 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 TISP43B9A030 160 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 B9A039 149 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 WISP1O95388 367 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 LTFP02788 710 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 LDHCP07864 332 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 FGFR1P11362 822 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 IFNGR1P15260 489 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 SLC9A1P19634 815 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 PICALMQ13492 652 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 RAPGEF1Q13905 1077 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 SLBPQ14493 270 aaKnown RBP eCLIP3.36□□□□□ -1.87
XRN1-210ENST00000472697 GPATCH4Q5T3I0 446 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 FAM43BQ6ZT52 329 aaPredicted RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 TMC3Q7Z5M5 1100 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 FCHSD1Q86WN1 690 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 MCATQ8IVS2 390 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 CCDC144CPQ8IYA2 1237 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 SLFN12Q8IYM2 578 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 CLASRPQ8N2M8 674 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 KREMEN2Q8NCW0 462 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 SLC35G2Q8TBE7 412 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 PPP1R13LQ8WUF5 828 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 KIAA1191Q96A73 305 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 AHCYL2Q96HN2 611 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 MRPL4Q9BYD3 311 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 PUS7LQ9H0K6 701 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 BHMT2Q9H2M3 363 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 NGRNQ9NPE2 291 aaKnown RBP3.36□□□□□ -1.87
XRN1-210ENST00000472697 CASS4Q9NQ75 786 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 PDLIM7Q9NR12 457 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 SLC6A14Q9UN76 642 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 AKT3Q9Y243 479 aa3.36□□□□□ -1.87
XRN1-210ENST00000472697 URB2Q14146 1524 aaKnown RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 KDM6BO15054 1643 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 KRBA1A5PL33 1030 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 WASH4PA8MWX3 477 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 DYNC1LI2O43237 492 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 RFPL1O75677 317 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 SMNDC1O75940 238 aaKnown RBP eCLIP3.35□□□□□ -1.87
XRN1-210ENST00000472697 KRT37O76014 449 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 IGFALSP35858 605 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 IL6STP40189 918 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 AFF1P51825 1210 aaKnown RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 LRRC32Q14392 662 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 TTLL4Q14679 1199 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms