RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 RASIP1Q5U651 963 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 NBPF6Q5VWK0 638 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 PLD6Q8N2A8 252 aaKnown RBP9.28□□□□□ -0.92
SCAF4-205ENST00000472318 FAM181AQ8N9Y4 354 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 GRIN3AQ8TCU5 1115 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 NETO1Q8TDF5 533 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 NBPF4Q96M43 638 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 FAM8A1Q9UBU6 413 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 A0A0C4DFX4 3053 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 RING1Q06587 406 aa9.27□□□□□ -0.93
SCAF4-205ENST00000472318 LLGL2Q6P1M3 1020 aa9.27□□□□□ -0.93
SCAF4-205ENST00000472318 LDHDQ86WU2 507 aa9.27□□□□□ -0.93
SCAF4-205ENST00000472318 DRC1Q96MC2 740 aa9.27□□□□□ -0.93
SCAF4-205ENST00000472318 ASAP1Q9ULH1 1129 aa9.27□□□□□ -0.93
SCAF4-205ENST00000472318 SBNO2Q9Y2G9 1366 aa9.26□□□□□ -0.93
SCAF4-205ENST00000472318 ITGB5P18084 799 aa9.26□□□□□ -0.93
SCAF4-205ENST00000472318 FBLN1P23142 703 aa9.26□□□□□ -0.93
SCAF4-205ENST00000472318 ZNF574Q6ZN55 896 aaPredicted RBP9.26□□□□□ -0.93
SCAF4-205ENST00000472318 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCAF4-205ENST00000472318 CWC22Q9HCG8 908 aaKnown RBP9.26□□□□□ -0.93
SCAF4-205ENST00000472318 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
SCAF4-205ENST00000472318 LTN1O94822 1766 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 SZT2Q5T011 3432 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 CELA3AP09093 270 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 USP17L7P0C7H9 530 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 NCLP19338 710 aaKnown RBP9.25□□□□□ -0.93
SCAF4-205ENST00000472318 HOXC9P31274 260 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 LRRC14Q15048 493 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 PPM1JQ5JR12 505 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 SPRED2Q7Z698 418 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 TOP6BLQ8N6T0 577 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 CAPNS2Q96L46 248 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 TAF1DQ9H5J8 278 aaPredicted RBP9.25□□□□□ -0.93
SCAF4-205ENST00000472318 SSU72Q9NP77 194 aaKnown RBP9.25□□□□□ -0.93
SCAF4-205ENST00000472318 SRP68Q9UHB9 627 aaKnown RBP9.25□□□□□ -0.93
SCAF4-205ENST00000472318 ABT1Q9ULW3 272 aaKnown RBP9.25□□□□□ -0.93
SCAF4-205ENST00000472318 CGNL1Q0VF96 1302 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
SCAF4-205ENST00000472318 CD163L1Q9NR16 1453 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 CEACAM5P06731 702 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 LDHBP07195 334 aaKnown RBP9.24□□□□□ -0.93
SCAF4-205ENST00000472318 RFC4P35249 363 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 OXCT1P55809 520 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 GRM1Q13255 1194 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 IFI16Q16666 785 aaKnown RBP9.24□□□□□ -0.93
SCAF4-205ENST00000472318 HABP4Q5JVS0 413 aaKnown RBP9.24□□□□□ -0.93
SCAF4-205ENST00000472318 PCNX4Q63HM2 1172 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 CYP4F22Q6NT55 531 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 RAPGEF4Q8WZA2 1011 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 MRRFQ96E11 262 aaKnown RBP9.24□□□□□ -0.93
SCAF4-205ENST00000472318 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
SCAF4-205ENST00000472318 CYP8B1Q9UNU6 501 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 TIAM2Q8IVF5 1701 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
SCAF4-205ENST00000472318 POLRMTO00411 1230 aaKnown RBP9.23□□□□□ -0.93
SCAF4-205ENST00000472318 FANCGO15287 622 aa9.23□□□□□ -0.93
SCAF4-205ENST00000472318 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
SCAF4-205ENST00000472318 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
SCAF4-205ENST00000472318 FRMD6Q96NE9 622 aa9.23□□□□□ -0.93
SCAF4-205ENST00000472318 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 RPS6KA4O75676 772 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 JUNBP17275 347 aaPredicted RBP9.22□□□□□ -0.93
SCAF4-205ENST00000472318 PRKCQQ04759 706 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 PLCL1Q15111 1095 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
SCAF4-205ENST00000472318 UBE3DQ7Z6J8 389 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 ANKRD13AQ8IZ07 590 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 CNTROBQ8N137 903 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 KIAA1522Q9P206 1035 aaPredicted RBP9.22□□□□□ -0.93
SCAF4-205ENST00000472318 VAV3Q9UKW4 847 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 CSADQ9Y600 493 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 KDRP35968 1356 aa9.22□□□□□ -0.93
SCAF4-205ENST00000472318 THSD7BQ9C0I4 1608 aa9.21□□□□□ -0.93
SCAF4-205ENST00000472318 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.93
SCAF4-205ENST00000472318 ERCC3P19447 782 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 TM4SF1P30408 202 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 GNA15P30679 374 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 BNIP3Q12983 259 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 FAM214BQ7L5A3 538 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 C12orf40Q86WS4 652 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 TNKS2Q9H2K2 1166 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 PCDHA4Q9UN74 947 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 PLAGL2Q9UPG8 496 aa9.21□□□□□ -0.94
SCAF4-205ENST00000472318 IQCA1LA6NCM1 817 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 PRPF40AO75400 957 aaKnown RBP9.2□□□□□ -0.94
SCAF4-205ENST00000472318 CD8BP10966 210 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 FUT4P22083 530 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 AMPHP49418 695 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 ZNF792Q3KQV3 632 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 SV2BQ7L1I2 683 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 SREK1Q8WXA9 508 aaKnown RBP9.2□□□□□ -0.94
SCAF4-205ENST00000472318 GAL3ST3Q96A11 431 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 GCC1Q96CN9 775 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 HEXIM2Q96MH2 286 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms