RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PCDHB4Q9Y5E5 795 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 SAT1P21673 171 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 CACNB3P54284 484 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 TFAMQ00059 246 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 ASPRV1Q53RT3 343 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 GOLGA5Q8TBA6 731 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 IFT81Q8WYA0 676 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 SEC62Q99442 399 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 PANK4Q9NVE7 773 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 LUC7L2Q9Y383 392 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 CPB1P15086 417 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 EIF2AK2P19525 551 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 ATICP31939 592 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 IL13P35225 146 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 GTF2F1P35269 517 aaKnown RBP eCLIP9.42□□□□□ -0.9
CD47-204ENST00000471694 CYP4A11Q02928 519 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 MAP7Q14244 749 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 STXBP2Q15833 593 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 CMTR1Q8N1G2 835 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 GIMAP8Q8ND71 665 aaPredicted RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 SLF1Q9BQI6 1058 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 SEC24BO95487 1268 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 SNRNP48Q6IEG0 339 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 RAVER2Q9HCJ3 691 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 CARMIL3Q8ND23 1372 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 KCNQ3O43525 872 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 RPS6KA2Q15349 733 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 RINT1Q6NUQ1 792 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 GIMAP6Q6P9H5 292 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 SERPINB13Q9UIV8 391 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 RARBP10826 455 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 PDE6CP51160 858 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 GPATCH4Q5T3I0 446 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 TRERF1Q96PN7 1200 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 MAP3K20Q9NYL2 800 aaKnown RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 RABGAP1Q9Y3P9 1069 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 ELP1O95163 1332 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 DIS3L2Q8IYB7 885 aaKnown RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 TLDC2A0PJX2 215 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 GSTA1P08263 222 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 GSTA2P09210 222 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 RPS6KB1P23443 525 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 AK2P54819 239 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 KBTBD3Q8NAB2 608 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 CCDC26Q8TAB7 109 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 PIGBQ92521 554 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 VPS16Q9H269 839 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 FBXL21Q9UKT6 434 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 SLC27A2O14975 620 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 TTBK2Q6IQ55 1244 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 ZNF654Q8IZM8 581 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 TCP11Q8WWU5 503 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 MAGED2Q9UNF1 606 aaPredicted RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 OVOS2A0A0G2JMS6 1433 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 OVOS2A0A0J9YW53 1432 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 OVOS2Q6IE36 1432 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 NBPF26B4DH59 902 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 N4BP1O75113 896 aaKnown RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 VAMP4O75379 141 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 RBM10P98175 930 aaKnown RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 MYLK4Q86YV6 388 aaPredicted RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 BLIDQ8IZY5 108 aa9.41□□□□□ -0.9
CD47-204ENST00000471694 UBLCP1Q8WVY7 318 aaPredicted RBP9.41□□□□□ -0.9
CD47-204ENST00000471694 ADCY9O60503 1353 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 CTAGE9A4FU28 777 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 LMNB1P20700 586 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 SSTR3P32745 418 aaPredicted RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 POSTNQ15063 836 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 CCL15Q16663 113 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 ADALQ6DHV7 355 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 TTC36A6NLP5 189 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 DYNLL1P63167 89 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 TICAM2Q86XR7 235 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 EFCAB13Q8IY85 973 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 PSPC1Q8WXF1 523 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 ZNF653Q96CK0 615 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 COPRSQ9NQ92 184 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 BSDC1Q9NW68 430 aaPredicted RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 GH2P01242 217 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 LARSQ9P2J5 1176 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 HPCAL4Q9UM19 191 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 THAP12O43422 761 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 KARSQ15046 597 aaKnown RBP9.4□□□□□ -0.9
CD47-204ENST00000471694 BEND3Q5T5X7 828 aa9.4□□□□□ -0.9
CD47-204ENST00000471694 PPP4R1Q8TF05 950 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms